Varsha Bommineni

Dr. Varsha Bommineni


Research Focus & Metrics

Academic Career Length

2Years (2025-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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7 January 2026 in Vaccines
Verified
Journal Article
Open access
PDF file
RNRoshen Neelawala
Roshen Neelawala
VBVarsha Bommineni
Varsha Bommineni
CGChaitanya Gottapu
Chaitanya Gottapu
LELekshmi Edison
Lekshmi Edison
KGKrishni K. Gunathilaka
Krishni K. Gunathilaka
SKSubhashinie Kariyawasam
Subhashinie Kariyawasam
Background: Non-typhoidal Salmonella (NTS) is a major foodborne pathogen, with poultry products, especially eggs, being the primary source of human infections. Current serovar-specific poultry vaccines effectively reduce targeted Salmonella serovars but may inadvertently promote the emergence of untargeted serovars within poultry flocks. Therefore, novel vaccine candidates providing broad cross-serovar protection are needed to improve overall effectiveness of Salmonella control programs. Objectives: This study evaluated the immunogenicity of the novel subunit vaccine candidate InvG and assessed its ability to reduce Salmonella colonization in vaccinated laying hens and their progeny through maternally derived antibodies transferred via egg yolk. Methodology: Three experiments were performed. Experiment I evaluated the immunogenicity of purified recombinant InvG by (a) measuring anti-InvG antibodies using an enzyme-linked immunosorbent assay (ELISA) and (b) completing transcriptomic profiling of immune responses in vaccinated chickens. Vaccinated chickens were subsequently challenged with Salmonella Enteritidis to assess the efficacy of anti InvG antibodies in reducing intestinal colonization of Salmonella. Experiment II involved immunizing hens with InvG, to evaluate passive transfer of antibodies via egg yolk and the protective efficacy of maternally derived antibodies against Salmonella challenge. Passive transfer was assessed by measuring IgY antibodies in hen serum, egg yolk, and progeny serum, as well as secretory IgA (sIgA) antibodies in progeny intestinal washings using ELISA. Protective efficacy was evaluated by orally challenging one-day-old chicks with three different Salmonella serovars. Experiment III assessed the persistence of anti-InvG antibodies in the serum of vaccinated hens and their transfer into eggs following two doses of InvG. Results: InvG vaccination induced robust IgY antibody responses in hens, with efficient maternal antibody transfer to progeny via egg yolk. A statistically significant reduction in Salmonella colonization was observed in both vaccinated hens and their progeny. Conclusions: These findings demonstrate that InvG represents a promising subunit vaccine candidate for Salmonella control in poultry and warrants further investigation towards development as a broadly protective commercial poultry vaccine against Salmonella.

17 October 2025 in Pathogens
Verified
Journal Article
Open access
PDF file
VBVarsha Bommineni
Varsha Bommineni
LELekshmi Edison
Lekshmi Edison
CGChaitanya Gottapu
Chaitanya Gottapu
GBGary David Butcher
Gary David Butcher
SKSubhashinie Kariyawasam
Subhashinie Kariyawasam
Campylobacter hepaticus is the etiological agent of Spotty Liver Disease (SLD), a newly emerging bacterial disease of laying hens resulting in significant mortality and production losses primarily in free-range systems. Although its economic impact continues to grow, the molecular basis of C. hepaticus pathogenesis remains poorly understood. In this study, we conducted transcriptomic profiling of C. hepaticus in three host-relevant conditions, exposure to chicken bile, infection of a chicken liver hepatocellular carcinoma (LMH) cell line, and isolation from liver lesions of naturally infected chickens. Through RNA-seq analysis, we found unique gene expression signatures in each environment. In the bile, C. hepaticus exhibited differential expression of 412 genes, with upregulation of genes related to motility, cell envelope remodeling, glycosylation, nitrate respiration, and multidrug efflux systems, indicating a stress-adaptive, metabolically active lifestyle. In LMH, on the other hand, 125 genes were differentially expressed, primarily reflecting downregulation of motility, oxidative stress response, chaperones, and core metabolic processes, suggesting that these cells adopt a less active, intracellular dormant lifestyle. Transcriptomic analysis of C. hepaticus isolated from the liver identified 26 differentially expressed genes, featuring selective upregulation of genes associated with nitrate respiration, sulfur metabolism, and pyridoxal 5’ phosphate homeostasis, alongside downregulation of the major outer membrane porin (momp), stress response chaperones (dnaK, groL), and genes involved in oxidative stress defense and energy production. Furthermore, the immune evasion-related gene cmeA and a glycosyltransferase gene were found to be highly upregulated. This study presents the first in-depth transcriptomic exploration of C. hepaticus in multiple host relevant niches. Our findings reveal niche-specific gene expression profiles and highlight metabolic and structural adaptations that enable C. hepaticus to survive during bile exposure, persist within host cells, and contribute to liver pathology. These insights provide a basis for identifying novel virulence determinants and may inform the development of targeted interventions, including vaccines or antimicrobial therapy, to control SLD in commercial poultry operations.

26 March 2026 in Vaccines
Verified
Journal Article
Open access
PDF file
CGChaitanya Gottapu
Chaitanya Gottapu
LELekshmi Edison
Lekshmi Edison
RNRoshen Neelawala
Roshen Neelawala
VBVarsha Bommineni
Varsha Bommineni
GBGary David Butcher
Gary David Butcher
SKSubhashinie Kariyawasam
Subhashinie Kariyawasam
Background/Objectives: Spotty liver disease (SLD), caused by Campylobacter hepaticus, is an emerging disease that leads to substantial production losses in the egg industry. The shift toward antibiotic-free and cage-free production systems has further intensified the impact of SLD. The current control measures largely rely on autogenous killed vaccines; however, their use is constrained by the slow and fastidious growth of C. hepaticus and inconsistent efficacy. To overcome these limitations, this study aimed to identify immunogenic mimotopes as vaccine candidates and express them on the surface of an avian pathogenic Escherichia coli (APEC) vector. Methods: To identify immunogenic mimotopes, Ph.D.-12 phage display peptide library was screened using the hyperimmune serum raised against killed whole-cell C. hepaticus in specific pathogen-free chickens. Subsequently, the outer membrane protein C (OmpC) of E. coli was used as a scaffold for constructing a surface display library. A single restriction site, PstI, located in the seventh external loop of OmpC, was strategically utilized to insert each 12-amino-acid mimotope with a six-histidine (6xHis) tag sequence at its N-terminus, generating ompC + mimotope fusion constructs. These constructs were cloned into the inducible expression vector pTrc and electroporated into an E. coli DH5α ∆ompC strain, which lacked ompC. The surface expression of the mimotopes was confirmed in vitro. The verified ompC + mimotope constructs were subsequently subcloned into the pYA3422 constitutive expression vector and electroporated into the APEC PSUO78 ∆aroA ∆asd vaccine vector strain. A chicken vaccination–challenge trial was conducted using nine groups of chickens, including an unvaccinated challenged control and an unvaccinated–unchallenged negative control. Each experimental group received a mixture of two recombinant E. coli strains carrying different mimotopes at a dose of 1 × 109 CFU, which were administered orally twice at 16 and 18 weeks of age. Results: Fourteen immunogenic mimotopes corresponding to 13 different C. hepaticus proteins were identified as potential vaccine candidates. The expression of these mimotopes on the surface of the E. coli was successfully demonstrated using the OmpC-mediated surface display system. Of the 14 mimotopes tested, two flagellar-related peptides and one major outer membrane protein (MOMP)-derived peptide elicited significant immune responses and conferred protection against the C. hepaticus challenge. Conclusions: We successfully developed a functional E. coli surface display system that was capable of expressing 12-amino-acid mimotopes of C. hepaticus, providing a robust platform for evaluating vaccine candidates against SLD. Immunogenicity and efficacy studies in chickens demonstrated that three identified mimotopes conferred protection against C. hepaticus colonization of the bile and liver. Future in vivo investigations are necessary to develop and evaluate the immunogenicity and protective efficacy of a multivalent mimotope vaccine consisting of three identified mimotopes against both C. hepaticus and APEC, utilizing the ΔaroA Δasd APEC PSU078 strain as the vaccine vector.

12 August 2025 in Preprints.org
Verified
Preprint
Open access
PDF file
VBVarsha Bommineni
Varsha Bommineni
LELekshmi Edison
Lekshmi Edison
CGChaitanya Gottapu
Chaitanya Gottapu
GBGary David Butcher
Gary David Butcher
SKSubhashinie Kariyawasam
Subhashinie Kariyawasam
Campylobacter hepaticus is the etiologic agent of Spotty Liver Disease (SLD), a newly emerging bacterial disease of laying hens resulting in massive mortality and production losses primarily in free-range systems. Although its economic impact continues to grow, the molecular basis of C. hepaticus pathogenesis is poorly understood. In this study, we conducted transcriptomic profiling of C. hepaticus in three host-relevant conditions, exposure to chicken bile, infection of a chicken liver hepatocellular carcinoma (LMH) cell line, and isolation from liver lesions of naturally infected chickens. Through RNA-seq analysis, we found unique gene expression signatures in each environment. In bile, C. hepaticus exhibited differential expression of 412 genes, with upregulation of genes related to motility, cell envelope remodeling, glycosylation, nitrate respiration, and multidrug efflux systems, indicating a stress-adaptive, metabolically active lifestyle. In LMH cells, on the other hand, 125 genes were differentially expressed, primarily reflecting downregulation of motility, oxidative stress response, chaperones, and core metabolic processes, which suggests of a low-activity, intracellular dormant lifestyle. Transcriptomic analysis of C. hepaticus isolated from the liver identified 26 differentially expressed genes, featuring selective upregulation of nitrate respiration, sulfur metabolism, and pyridoxal 5’ phosphate (PLP) homeostasis, along with down regulation the major outer membrane porin (mompA), stress response chaperones (dnaK, groL), and genes involved in oxidative stress defense and energy production-. Further, immune evasion-related gene cmeA and a glycosyltransferase were found to be highly upregulated. This work presents the first in-depth transcriptomic exploration of C. hepaticus in multiple host relevant niches. Our findings reveal niche-specific gene expression profiles and highlight metabolic and structural accommodations allowing C. hepaticus survival during bile exposure, persistence within host cells, and induction of liver pathology. These insights provide a basis for the identification of novel virulence determinants and may inform the development of targeted interventions, including vaccines or antimicrobial therapy, to control SLD in commercial poultry operations.

30 September 2026 in Pathogens
Verified
Journal Article
Open access
PDF file
VBVarsha Bommineni
Varsha Bommineni
LELekshmi Edison
Lekshmi Edison
SKSubhashinie Kariyawasam
Subhashinie Kariyawasam
Campylobacter spp., particularly Campylobacter jejuni and Campylobacter coli, remain the leading bacterial causes of foodborne gastroenteritis worldwide, with poultry serving as the dominant reservoir and additional transmission routes involving livestock, raw milk, water, fresh produce, and food-processing environments. Accurate detection and quantification are essential for risk assessment, process hygiene monitoring, outbreak investigation, and One Health surveillance; however, reliable measurement is complicated by the organism’s fastidious microaerophilic growth requirements, stress sensitivity, low or uneven distribution in complex matrices, and ability to enter viable but non-culturable (VBNC) states. This review examines current and emerging approaches for Campylobacter detection and quantification across the food production continuum, including pre-harvest, harvest and processing, post-harvest, and retail, as well as consumer-level settings. Conventional culture, colony-count enumeration, most probable number (MPN) methods, and immunological assays are compared with molecular approaches, including polymerase chain reaction (PCR), qPCR, digital PCR, viability PCR, whole-genome sequencing, metagenomics, biosensors, microfluidics, and artificial intelligence-assisted surveillance. Regulatory and standardization frameworks, including the International Organization of Standards (ISO), Food and Drug Administration (FDA), United States Department of Agriculture-Food Safety and Inspection Service (USDA-FSIS), and European Union (EU) process hygiene criteria are discussed, together with One Health surveillance systems. Overall, future Campylobacter monitoring will require integrated, matrix-specific strategies that combine standardized culture-based enumeration, viability-informed molecular quantification, genomic source attribution, and harmonized metadata to support more rapid, accurate, and risk-based food-safety decision-making.