Tomasz Dziubich

Dr. Tomasz Dziubich

orcid

Research Focus & Metrics

Academic Career Length

7Years (2020-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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6 June 2024 in International Journal of Medical Informatics
Verified
Journal Article
Open access
MBMaciej Bobowicz
Maciej Bobowicz
MBMikołaj Badocha
Mikołaj Badocha
KGKatarzyna Gwozdziewicz
Katarzyna Gwozdziewicz
MRMarlena Rygusik
Marlena Rygusik
PKPaulina Kalinowska
Paulina Kalinowska
TDTomasz Dziubich
Tomasz Dziubich
The development of computer-aided diagnosis systems in breast cancer imaging is exponential. Since 2016, 81 papers have described the automated segmentation of breast lesions in ultrasound images using artificial intelligence. However, only two papers have dealt with complex BI-RADS classifications. This study addresses the automatic classification of breast lesions into binary classes (benign vs. malignant) and multiple BI-RADS classes based on a single ultrasonographic image. Achieving this task should reduce the subjectivity of an individual operator's assessment. Automatic image segmentation methods (PraNet, CaraNet and FCBFormer) adapted to the specific segmentation task were investigated using the U-Net model as a reference. A new classification method was developed using an ensemble of selected segmentation approaches. All experiments were performed on publicly available BUS B, OASBUD, BUSI and private datasets. FCBFormer achieved the best outcomes for the segmentation task with intersection over union metric values of 0.81, 0.80 and 0.73 and Dice values of 0.89, 0.87 and 0.82, respectively, for the BUS B, BUSI and OASBUD datasets. Through a series of experiments, we determined that adding an extra 30-pixel margin to the segmentation mask counteracts the potential errors introduced by the segmentation algorithm. An assembly of the full image classifier, bounding box classifier and masked image classifier was the most accurate for binary classification and had the best accuracy (ACC; 0.908), F1 (0.846) and area under the receiver operating characteristics curve (AUROC; 0.871) in the BUS B and ACC (0.982), F1 (0.984) and AUROC (0.998) in the UCC BUS datasets, outperforming each classifier used separately. It was also the most effective for BI-RADS classification, with ACC of 0.953, F1 of 0.920 and AUROC of 0.986 in UCC BUS. Hard voting was the most effective method for dichotomous classification. For the multi-class BI-RADS classification, the soft voting approach was employed. The proposed new classification approach with an ensemble of segmentation and classification approaches proved more accurate than most published results for binary and multi-class BI-RADS classifications.

8 December 2023 in Sensors
Verified
Journal Article
Open access
PDF file
ABAdam Brzeski
Adam Brzeski
TDTomasz Dziubich
Tomasz Dziubich
HKHenryk Krawczyk
Henryk Krawczyk
The presented paper investigates the problem of endoscopic bleeding detection in endoscopic videos in the form of a binary image classification task. A set of definitions of high-level visual features of endoscopic bleeding is introduced, which incorporates domain knowledge from the field. The high-level features are coupled with respective feature descriptors, enabling automatic capture of the features using image processing methods. Each of the proposed feature descriptors outputs a feature activation map in the form of a grayscale image. Acquired feature maps can be appended in a straightforward way to the original color channels of the input image and passed to the input of a convolutional neural network during the training and inference steps. An experimental evaluation is conducted to compare the classification ROC AUC of feature-extended convolutional neural network models with baseline models using regular color image inputs. The advantage of feature-extended models is demonstrated for the Resnet and VGG convolutional neural network architectures.

18 August 2020
Verified
Book Chapter
Closed access
PDF file
TDTomasz Dziubich
Tomasz Dziubich
PBPaweł Białas
Paweł Białas
ŁZŁukasz Znaniecki
Łukasz Znaniecki
JHJoanna Halman
Joanna Halman
JBJakub Brzeziński
Jakub Brzeziński



26 September 2025 in Applied Sciences
Verified
Journal Article
Open access
PDF file
DLDominik Bernard Lau
Dominik Bernard Lau
TDTomasz Dziubich
Tomasz Dziubich
This paper addresses the problem of automatically reconstructing three-dimensional coronary vessel trees from a series of X-ray angiography images, a task which remains difficult, particularly with respect to solutions requiring no additional user input. This study analyses the performance of a visual hull-based algorithm, producing the actual positions of heart arteries in the coordinate system, which is an approach not sufficiently explored in XRA images analysis. The proposed algorithm first creates a bounding cube using a novel heuristic and then iteratively projects the cube onto preprocessed 2D images, removing points too far from the depicted arteries. The method performance is first evaluated on a synthetic dataset through a series of experiments, and for a set of common clinical angles, 3D Dice of 75.25% and 78.61% reprojection Dice is obtained, which rivals the state-of-the-art machine learning methods. The findings suggest that the method offers a promising and interpretable alternative to black box methods on the synthethic dataset in question.