Kyoko Koshibu

Dr. Kyoko Koshibu

orcid

Research Focus & Metrics

Academic Career Length

29Years (1998-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
14 October 2009 in Journal of Neuroscience
Verified
Journal Article
Open access
PDF file
KKKyoko Koshibu
Kyoko Koshibu
JGJohannes Gräff
Johannes Gräff
MBMonique Beullens
Monique Beullens
FHFabrice D. Heitz
Fabrice D. Heitz
DBDominik Berchtold
Dominik Berchtold
IMIsabelle Mansuey
Isabelle Mansuey
Chromatin remodeling through histone posttranslational modifications (PTMs) and DNA methylation has recently been implicated in cognitive functions, but the mechanisms involved in such epigenetic regulation remain poorly understood. Here, we show that protein phosphatase 1 (PP1) is a critical regulator of chromatin remodeling in the mammalian brain that controls histone PTMs and gene transcription associated with long-term memory. Our data show that PP1 is present at the chromatin in brain cells and interacts with enzymes of the epigenetic machinery including HDAC1 (histone deacetylase 1) and histone demethylase JMJD2A (jumonji domain-containing protein 2A). The selective inhibition of the nuclear pool of PP1 in forebrain neurons in transgenic mice is shown to induce several histone PTMs that include not only phosphorylation but also acetylation and methylation. These PTMs are residue-specific and occur at the promoter of genes important for memory formation like CREB (cAMP response element-binding protein) and NF-κB (nuclear factor-κB). These histone PTMs further co-occur with selective binding of RNA polymerase II and altered gene transcription, and are associated with improved long-term memory for objects and space. Together, these findings reveal a novel mechanism for the epigenetic control of gene transcription and long-term memory in the adult brain that depends on PP1.

20 April 2008 in Nature Neuroscience
Verified
Journal Article
Closed access
KBKarsten Baumgärtel
Karsten Baumgärtel
DGDavid Genoux
David Genoux
HWHans Welzl
Hans Welzl
RTRy Y Tweedie-Cullen
Ry Y Tweedie-Cullen
KKKyoko Koshibu
Kyoko Koshibu
IMIsabelle Mansuey
Isabelle Mansuey

1 July 1998 in Journal of Biological Chemistry
Verified
Journal Article
Open access
PDF file
PFPhilip J. Fay
Philip J. Fay
KKKyoko Koshibu
Kyoko Koshibu
Factor VIIIa, the protein cofactor for factor IXa, is comprised of A1, A2, and A3-C1-C2 subunits. Isolated subunits of factor VIIIa were examined for their ability to accelerate the factor IXa-catalyzed activation of factor X. The A2 subunit enhanced the k cat for this conversion by 100-fold whereas the K m for factor X was unaffected. The apparent K d for the interaction of A2 subunit with factor IXa was ∼300 nm. Similar results were obtained using purified A2 expressed as the isolated domain in Chinese hamster ovary cells, although this material was less stable than the factor VIIIa-derived material. Isolated A1 and A3-C1-C2 subunits showed no effect on the rate of factor X conversion. A2 subunit increased the fluorescence anisotropy of fluorescein-Phe-Phe-Arg-factor IXa (Δr = 0.015) and markedly increased anisotropy in the presence of factor X (Δr = 0.057), suggesting that it contributes to the orientation of the factor IXa active site and its relation to substrate. A synthetic peptide to A2 residues 558–565 inhibited the A2-dependent enhancement of factor X activation with an IC50 = 40 μm, a value similar to its K i for inhibition of the intrinsic factor Xase (105 μm). These results indicate that the isolated A2 subunit modulates the active site of factor IXa and identifies a functional role for this subunit in factor VIIIa.


1 August 2004 in NeuroImage
Verified
Journal Article
Closed access
KKKyoko Koshibu
Kyoko Koshibu
PLPat Levitt
Pat Levitt
EAEric T Ahrens
Eric T Ahrens

28 June 2010 in Learning & Memory
Verified
Journal Article
Open access
PDF file
JGJohannes Gräff
Johannes Gräff
KKKyoko Koshibu
Kyoko Koshibu
AJAnne Jouvenceau
Anne Jouvenceau
PDPatrick Dutar
Patrick Dutar
IMIsabelle Mansuey
Isabelle Mansuey
Gene transcription is essential for the establishment and the maintenance of long-term memory (LTM) and for long-lasting forms of synaptic plasticity. The molecular mechanisms that control gene transcription in neuronal cells are complex and recruit multiple signaling pathways in the cytoplasm and the nucleus. Protein kinases (PKs) and phosphatases (PPs) are important players in these mechanisms. Protein serine/threonine phosphatase 1 (PP1), in particular, was recently shown to be important for transcription-dependent memory by regulating chromatin remodeling. However, the impact of PP1 on gene transcription in adult neurons remains not fully delineated. Here, we demonstrate that the nuclear pool of PP1 is associated with transcriptional events involving molecular components of signaling cascades acting as positive and negative regulators of memory and brain plasticity. The data show that inhibiting this pool selectively in forebrain neurons improves memory performance, enhances long-term potentiation (LTP), and modulates gene transcription. These findings highlight an important role for PP1 in the regulation of gene transcription in LTM and synaptic plasticity in the adult brain.