Results of computational analysis and visualization of differences in gene structures using polarization coding are presented. A two-dimensional phase screen, where each element of which corresponds to a specific basic nucleotide (adenine, cytosine, guanine, or thymine), displays the analyzed nucleotide sequence. Readout of the screen with a coherent beam characterized by a given polarization state forms a diffracted light field with a local polarization structure that is unique for the analyzed nucleotide sequence. This unique structure is described by spatial distributions of local values of the Stokes vector components. Analysis of these distributions allows the comparison of nucleotide sequences for different strains of pathogenic microorganisms and frequency analysis of the sequences. The possibilities of this polarization-based technique are illustrated by the model data obtained from a comparative analysis of the spike protein gene sequences for three different model variants (Wuhan, Delta, and Omicron) of the SARS-CoV-2 virus. Various modifications of polarization encoding and analysis of gene structures and a possibility for instrumental implementation of the proposed method are discussed.

Self-similar expansion of bubble embryos in a plasticized polymer under quasi-isothermal depressurization is examined using the experimental data on expansion rates of embryos in the CO₂-plasticized d,l-polylactide and modeling the results. The CO₂ initial pressure varied from 5 to 14 MPa, and the depressurization rate was 5 × 10⁻³ MPa/s. The constant temperature in experiments was in a range from 310 to 338 K. The initial rate of embryos expansion varied from ≈0.1 to ≈10 µm/s, with a decrease in the current external pressure. While modeling, a non-linear behavior of CO₂ isotherms near the critical point was taken into account. The modeled data agree satisfactorily with the experimental results. The effect of a remarkable increase in the expansion rate at a decreasing external pressure is interpreted in terms of competing effects, including a decrease in the internal pressure, an increase in the polymer viscosity, and an increase in the embryo radius at the time of embryo formation. The vanishing probability of finding the steadily expanding embryos for external pressures around the CO₂ critical pressure is interpreted in terms of a joint influence of the quasi-adiabatic cooling and high compressibility of CO₂ in the embryos.

A method for visualization and identification of nucleotide sequences is proposed based on the synthesis of phase screens displaying the structure of the analyzed sequences and reconstruction of binary maps of the extreme values of the local Stokes vector components in the diffraction zone. This diffraction zone is formed due to reading out the phase screen by a coherent collimated beam with two orthogonally polarized (x–y) components. With different phase delays of the x–y components of the readout beam introduced by the phase screen elements, this causes a variety of local polarization states in the diffraction zone. The discrimination level for the local component of the Stokes vector chosen for the binary mapping is established near the extreme value for this component. Computer verification of the proposed method using nucleotide sequences for various strains of the model African swine fewer (ASF) virus as the test objects shows its high efficiency in the detection of differences between two compared sequences corresponding to the same type of infectious agent. Analysis of the model data for the strains under study made it possible to establish a power-law character of correlation coefficients of the synthesized binary distributions of extreme local polarization states depending on the discrimination threshold detuning from the maximum value of the Stokes vector component used for the mapping.

Microscopic structural rearrangements in expanding polylactide foams were probed using multiple dynamic scattering of laser radiation in the foam volume. Formation and subsequent expansion of polylactide foams was provided by a rapid or slow depressurization of the “plasticized polylactide–supercritical carbon dioxide” system. Dynamic speckles induced by a multiple scattering of laser radiation in the expanding foam were analyzed using the stacked speckle history technique, which is based on a joint mapping of spatial–temporal dynamics of evolving speckle patterns. A significant decrease in the depressurization rate in the case of transition from a rapid to slow foaming (from 0.03 MPa/s to 0.006 MPa/s) causes dramatic changes in the texture of the synthesized stacked speckle history maps. These changes are associated with transition from the boiling dynamics of time-varying speckles to their pronounced translational motions and are manifested as significant slopes of individual speckle traces on the recovered stacked speckle history maps. This feature is interpreted in terms of the actual absence of a new cell nucleation effect in the expanding foam upon slow depressurization on the dynamic scattering of laser radiation.

Polylactide foaming as the key stage in laboratory preparation of highly porous biocompatible matrices used as scaffold prototypes was monitored based the effect of dynamic light scattering in expanding polylactide foams. Intensity fluctuations of scattered laser radiation in the course of foam expansion were analyzed using ensemble-averaged estimates of the speckle lifetime within a running window in the time domain. It was found that, in contrast to the commonly used correlation time of intensity fluctuations, the values of the average speckle lifetime are invariant with respect to the type of dynamics of phase fluctuations of partial components in scattered radiation. This makes it possible to relate this parameter to microscopic mobility of interphase boundaries in the foam in the absence of a priori information on the law of motion relating these boundaries at the microscopic level. The proposed approach in combination with the developed phenomenological model describing the relationship between the average speckle lifetime and the current values of the foam volume, as well as its first-time derivative made it possible to interpret the features of foam structure formation.

Visualization and Characterization of Nucleotide Sequences in Bioinformatics: State-of-Art in the Past and Present