Sun Shin

Dr. Sun Shin

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Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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6 August 2022 in Nature Communications
Verified
Journal Article
Open access
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SJSeungHyun Jung
SeungHyun Jung
BHByung-Hee Hwang
Byung-Hee Hwang
SSSun Shin
Sun Shin
EPEun-Hye Park
Eun-Hye Park
SPSin-Hee Park
Sin-Hee Park
Yeun-Jun ChungYeun-Jun Chung
Yeun-Jun Chung
Heart failure (HF) is a frequent consequence of myocardial infarction (MI). Identification of the precise, time-dependent composition of inflammatory cells may provide clues for the establishment of new biomarkers and therapeutic approaches targeting post-MI HF. Here, we investigate the spatiotemporal dynamics of MI-associated immune cells in a mouse model of MI using spatial transcriptomics and single-cell RNA-sequencing (scRNA-seq). We identify twelve major immune cell populations; their proportions dynamically change after MI. Macrophages are the most abundant population at all-time points (>60%), except for day 1 post-MI. Trajectory inference analysis shows upregulation of Trem2 expression in macrophages during the late phase post-MI. In vivo injection of soluble Trem2 leads to significant functional and structural improvements in infarcted hearts. Our data contribute to a better understanding of MI-driven immune responses and further investigation to determine the regulatory factors of the Trem2 signaling pathway will aid the development of novel therapeutic strategies for post-MI HF.

11 June 2021 in npj Genomic Medicine
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Journal Article
Open access
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SSSun Shin
Sun Shin
YPYong Hyun Park
Yong Hyun Park
SJSeung-Hyun Jung
Seung-Hyun Jung
SJSun-Hee Jang
Sun-Hee Jang
MKMee Young Kim
Mee Young Kim
Yeun-Jun ChungYeun-Jun Chung
Yeun-Jun Chung
Predicting the risk of metastasis before starting prostate cancer (PCa) treatment can minimize the overtreatment of indolent cases and help choosing appropriate treatment. The levels of circulating microRNAs (miRNAs) from body fluids can be used as noninvasive prognostic biomarkers. In this study, urinary exosomal miRNA expression profiles of 149 PCas were determined and the miRNAs associated with metastasis were identified: miR-21, miR-16, miR-142-3p, miR-451, and miR-636. When evaluating clinical factors together, miR-21, miR-451, miR-636, and preoperative prostate-specific antigen (PSA) level remained significant in the multivariate analysis. Based on them, we developed a “Prostate Cancer Metastasis Risk Scoring (PCa-MRS)” model. The PCa-MRS showed superior stratification power (AUC = 0.925) to preoperative PSA or clinical Gleason score. Patients with high scores showed significantly poorer biochemical recurrence-free survival than those with low scores (P = 6.53 × 10−10). Our results showed the potential of urinary exosomal miRNAs as noninvasive markers for predicting metastasis and prognosis in PCa patients.

8 September 2023 in The Journal of Pathology
Verified
Journal Article
Closed access
SSSun Shin
Sun Shin
YCYoun-Jee Chung
Youn-Jee Chung
SMSeong Won Moon
Seong Won Moon
ECEun Ji Choi
Eun Ji Choi
MKMee-Ran Kim
Mee-Ran Kim
SLSug Hyung Lee
Sug Hyung Lee

7 March 2021 in Cells
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Journal Article
Open access
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YJYun-Mi Jeong
Yun-Mi Jeong
CBChul Hwan Bang
Chul Hwan Bang
MPMinJi Park
MinJi Park
SSSun Shin
Sun Shin
SYSeokhwan Yun
Seokhwan Yun
SJSongwan Jin
Songwan Jin
The development of an in vitro three-dimensional (3D) culture system with cryopreserved biospecimens could accelerate experimental research screening anticancer drugs, potentially reducing costs and time bench-to-beside. However, minimal research has explored the application of 3D bioprinting-based in vitro cancer models to cryopreserved biospecimens derived from patients with advanced melanoma. We investigated whether 3D-printed collagen scaffolds enable the propagation and maintenance of patient-derived melanoma explants (PDMEs). 3D-printed collagen scaffolds were fabricated with a 3DX bioprinter. After thawing, fragments from cryopreserved PDMEs (approximately 1–2 mm) were seeded onto the 3D-printed collagen scaffolds, and incubated for 7 to 21 days. The survival rate was determined with MTT and live and dead assays. Western blot analysis and immunohistochemistry staining was used to express the function of cryopreserved PDMEs. The results show that 3D-printed collagen scaffolds could improve the maintenance and survival rate of cryopreserved PDME more than 2D culture. MITF, Mel A, and S100 are well-known melanoma biomarkers. In agreement with these observations, 3D-printed collagen scaffolds retained the expression of melanoma biomarkers in cryopreserved PDME for 21 days. Our findings provide insight into the application of 3D-printed collagen scaffolds for closely mimicking the 3D architecture of melanoma and its microenvironment using cryopreserved biospecimens.

16 July 2022 in Journal of Investigative Dermatology
Verified
Journal Article
Closed access
YKYOON-SEOB KIM
YOON-SEOB KIM
SSSun Shin
Sun Shin
ECEun Ji Choi
Eun Ji Choi
SMSeong Won Moon
Seong Won Moon
Chan Kwon JungChan Kwon Jung
Chan Kwon Jung
SLSug Hyung Lee
Sug Hyung Lee

31 December 2020 in Genomics & Informatics
Verified
Journal Article
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SZSongzi Zhang
Songzi Zhang
JSJuyoun Shin
Juyoun Shin
SSSun Shin
Sun Shin
Yeun-Jun ChungYeun-Jun Chung
Yeun-Jun Chung
Avian influenza (AIV) outbreaks can induce fatal human pulmonary infections in addition to economic losses to the poultry industry. In this study, we aimed to develop a rapid and sensitive point-of-care AIV test using loop-mediated isothermal amplification (LAMP) technology. We designed three sets of reverse transcription LAMP (RT-LAMP) primers targeting the matrix (M) and hemagglutinin (HA) genes of the H5 and H9 subtypes. RT-LAMP targeting the universal M gene was designed to screen for the presence of AIV and RT-LAMP assays targeting H5-HA and H9-HA were designed to discriminate between the H5 and H9 subtypes. All three RT-LAMP assays showed specific amplification results without nonspecific reactions. In terms of sensitivity, the detection limits of our RT-LAMP assays were 100 to 1,000 RNA copies per reaction, which were 10 times more sensitive than the detection limits of the reference reverse‒transcription polymerase chain reaction (RT-PCR) (1,000 to 10,000 RNA copies per reaction). The reaction time of our RT-LAMP assays was less than 30 minutes, which was approximately four times quicker than that of conventional RT-PCR. Altogether, these assays successfully detected the existence of AIV and discriminated between the H5 or H9 subtypes with higher sensitivity and less time than the conventional RT-PCR assay.