Rafael Oliva

Rafael Oliva

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Research Focus & Metrics

Academic Career Length

45Years (1982-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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31 March 2006 in Human Reproduction Update
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Journal Article
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RORafael Oliva
Rafael Oliva
Protamines are the major nuclear sperm proteins. The human sperm nucleus contains two types of protamine: protamine 1 (P1) encoded by a single-copy gene and the family of protamine 2 (P2) proteins (P2, P3 and P4), all also encoded by a single gene that is transcribed and translated into a precursor protein. The protamines were discovered more than a century ago, but their function is not yet fully understood. In fact, different hypotheses have been proposed: condensation of the sperm nucleus into a compact hydrodynamic shape, protection of the genetic message delivered by the spermatozoa, involvement in the processes maintaining the integrity and repair of DNA during or after the nucleohistone–nucleoprotamine transition and involvement in the epigenetic imprinting of the spermatozoa. Protamines are also one of the most variable proteins found in nature, with data supporting a positive Darwinian selection. Changes in the expression of P1 and P2 protamines have been found to be associated with infertility in man. Mutations in the protamine genes have also been found in some infertile patients. Transgenic mice defective in the expression of protamines also present several structural defects in the sperm nucleus and have variable degrees of infertility. There is also evidence that altered levels of protamines may result in an increased susceptibility to injury in the spermatozoan DNA causing infertility or poor outcomes in assisted reproduction. The present work reviews the articles published to date on the relationship between protamines and infertility.

1 January 1991
Verified
Book Chapter
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RORafael Oliva
Rafael Oliva
GDGordon H. Dixon
Gordon H. Dixon

29 September 2013 in Human Reproduction Update
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Journal Article
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AAAlexandra Amaral
Alexandra Amaral
JCJudit Castillo
Judit Castillo
Joao Ramalho-SantosJoao Ramalho-Santos
Joao Ramalho-Santos
RORafael Oliva
Rafael Oliva
The human sperm cell is very well suited for proteomic studies, as it is accessible, can be easily purified and is believed to be transcriptionally and translationally silent. The recent use of advanced proteomic approaches is clearly challenging the understanding of sperm biology. The aims of this review are to discuss the various human sperm proteomic studies, to create a compiled list of all the sperm proteins described to date and to re-assess the potential functional implications. A search of the scientific literature available in the PubMed/Medline database at 31 December 2012 was conducted for studies on human sperm proteomics. The complete list of proteins obtained was carefully analysed using different bioinformatics tools, including Reactome, a knowledgebase of biological pathways. A total of 30 studies were identified. The proteomics studies have resulted in the identification of 6198 different proteins, an important proportion of which (around 30%) are known to be expressed in the testis. The proteins were assigned to various functional pathways, including metabolism, apoptosis, cell cycle, meiosis and membrane trafficking, among others. Unexpectedly, the sperm cell also contains a range of proteins involved in RNA metabolism and translational regulation, as well as proteins usually located in organelles believed to be absent in sperm, such as cytoplasmatic ribosomes and peroxisomes. Additionally, some proteins whose levels seem to be altered in low-quality sperm might have clinical relevance. The analysis of the most complete sperm proteome available to date indicates the presence of several cellular protein pathways previously ignored in the male gamete. Confirming the activity of each of these pathways and understanding their biological significance will certainly boost the knowledge of human sperm and male fertility and infertility in the next years.

31 January 2008 in Human Reproduction
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JMJuan Martínez-Heredia
Juan Martínez-Heredia
SMSara de Mateo
Sara de Mateo
JTJose Manuel Manuel Vidal Taboada
Jose Manuel Manuel Vidal Taboada
JBJosé Luis Ballescà
José Luis Ballescà
RORafael Oliva
Rafael Oliva
Asthenozoospermia is one of the most common findings present in infertile males, but its aetiology remains unknown in most cases. Present proteomic tools now offer the opportunity to identify proteins which are differentially expressed in asthenozoospermic semen samples and potentially involved in infertility. We compared the expression of 101 sperm protein spots in 20 asthenozoospermic samples to that of 10 semen donor controls using two-dimensional proteomic analysis. Seventeen protein spots have been identified at different amounts in the asthenozoospermic samples compared with controls. These are cytoskeletal actin-B, annexin-A5, cytochrome C oxidase-6B, histone H2A, prolactin-inducible protein and precursor, calcium binding protein-S100A9 (2 spots), clusterin precursor, dihydrolipoamide dehydrogenase precursor, fumarate hydratase precursor, heat shock protein-HSPA2, inositol-1 monophosphatase, 3-mercapto-pyruvate sulfurtransferase/dienoyl-CoA isomerase precursor, proteasome subunit-PSMB3, semenogelin 1 precursor and testis expressed sequence 12. The detected amount of these proteins enabled the grouping of asthenozoospermic sperm samples in an unsupervised clustering analysis. We have identified several proteins present at different amount in asthenozoospermic sperm samples. These proteins could be candidates towards the development of diagnostic markers, and open up the opportunity to gain further insight into the pathogenic mechanisms involved in asthenozoospermia.

1 June 2009 in Archives of Clinical Neuropsychology
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Journal Article
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JPJordi Peña-Casanova
Jordi Peña-Casanova
RBRafael Blesa
Rafael Blesa
MAMiquel Aguilar
Miquel Aguilar
NGNina Gramunt-Fombuena
Nina Gramunt-Fombuena
BGBeatriz Gómez-Ansón
Beatriz Gómez-Ansón
FTfor the NEURONORMA Study Team
for the NEURONORMA Study Team
This paper describes the methods and sample characteristics of a series of Spanish normative studies (The NEURONORMA project). The primary objective of our research was to collect normative and psychometric information on a sample of people aged over 49 years. The normative information was based on a series of selected, but commonly used, neuropsychological tests covering attention, language, visuo-perceptual abilities, constructional tasks, memory, and executive functions. A sample of 356 community dwelling individuals was studied. Demographics, socio-cultural, and medical data were collected. Cognitive normality was validated via informants and a cognitive screening test. Norms were calculated for midpoint age groups. Effects of age, education, and sex were determined. The use of these norms should improve neuropsychological diagnostic accuracy in older Spanish subjects. These data may also be of considerable use for comparisons with other normative studies. Limitations of these normative data are also commented on.

1 February 2013 in Molecular & Cellular Proteomics
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Journal Article
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AAAlexandra Amaral
Alexandra Amaral
JCJudit Castillo
Judit Castillo
JEJosep Maria Estanyol
Josep Maria Estanyol
JBJosé Luís Ballescà
José Luís Ballescà
Joao Ramalho-SantosJoao Ramalho-Santos
Joao Ramalho-Santos
RORafael Oliva
Rafael Oliva
Proteomic studies are contributing greatly to our understanding of the sperm cell, and more detailed descriptions are expected to clarify additional cellular and molecular sperm attributes. The aim of this study was to characterize the subcellular proteome of the human sperm tail and, hopefully, identify less concentrated proteins (not found in whole cell proteome studies). Specifically, we were interested in characterizing the sperm metabolic proteome and gaining new insights into the sperm metabolism issue. Sperm were isolated from normozoospermic semen samples and depleted of any contaminating leukocytes. Tail fractions were obtained by means of sonication followed by sucrose-gradient ultracentrifugation, and their purity was confirmed via various techniques. Liquid chromatography and tandem mass spectrometry of isolated sperm tail peptides resulted in the identification of 1049 proteins, more than half of which had not been previously described in human sperm. The categorization of proteins according to their function revealed two main groups: proteins related to metabolism and energy production (26%), and proteins related to sperm tail structure and motility (11%). Interestingly, a great proportion of the metabolic proteome (24%) comprised enzymes involved in lipid metabolism, including enzymes for mitochondrial beta-oxidation. Unexpectedly, we also identified various peroxisomal proteins, some of which are known to be involved in the oxidation of very long chain fatty acids. Analysis of our data using Reactome suggests that both mitochondrial and peroxisomal pathways might indeed be active in sperm, and that the use of fatty acids as fuel might be more preponderant than previously thought. In addition, incubation of sperm with the fatty acid oxidation inhibitor etomoxir resulted in a significant decrease in sperm motility. Contradicting a common concept in the literature, we suggest that the male gamete might have the capacity to obtain energy from endogenous pools, and thus to adapt to putative exogenous fluctuations.