Lei Shi

Dr. Lei Shi


Research Focus & Metrics

Academic Career Length

7Years (2020-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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31 March 2023 in Animals
Verified
Journal Article
Open access
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CZCheng Zhang
Cheng Zhang
EHErying Hao
Erying Hao
XCXiangyu Chen
Xiangyu Chen
CHChenxuan Huang
Chenxuan Huang
GLGengyun Liu
Gengyun Liu
YCYifan Chen
Yifan Chen
There are few systematic studies on the dietary fiber requirements of broilers in the late feeding stage, and there are not enough data to support this hypothesis. This experiment was conducted to examine the effects of dietary fiber level on growth performance, nutrient digestibility, immune function and intestinal morphology of broilers from day 22 to 42. A total of 480 one-day-old Arbor Acres broilers with half male and half female were randomly allocated into four groups, with eight replicates in each group and fifteen chickens in each replicate. The experimental period was 42 days. All broilers were fed a basal diet from 1 to 21 days. During the 22–42 day period, the four experimental groups were fed diets with soybean hulls as the fiber source, and crude fiber (CF) levels were 2%, 5%, 8% and 11%, respectively. The results showed that during the 29–42 day period, the average daily feed intake (ADFI) of broilers was higher in the 5% CF and 8% CF groups (p < 0.05), and during the 29–35 day period, the average daily gain (ADG) of broilers was higher and the ratio of feed and gain (F/G) of broilers was lower in the 5% CF and 8% CF groups (p < 0.05). The digestibility of crude protein (CP), ether extract (EE), CF, acid detergent fiber (ADF) and neutral detergent fiber (NDF) was higher in broilers of the 8% CF group (p < 0.05). The immunoglobulin A (IgA), immunoglobulin G (IgG) and immunoglobulin M (IgM) content of the plasma of broilers was higher in the 8% CF group (p < 0.05). The villus height (VH) of the duodenum, jejunum and ileum of broilers was higher, and the crypt depth (CD) was lower in the 8% CF group than that in the 2% CF group (p < 0.05). The ratio of VH and CD (V/C) of the duodenum and jejunum of broilers in the 8% CF group was higher than that in the 2% CF group (p < 0.05). The quadratic regression analysis showed that the optimum dietary CF level was 7–9%. In conclusion, under the conditions of this experiment, a diet of 7–9% CF may promote growth performance by improving the nutrient digestibility, immunity and intestinal morphology of broilers from day 22 to 42.

1 December 2020 in Poultry Science
Verified
Journal Article
Open access
AIAdamu Mani Isa
Adamu Mani Isa
YSYanyan Sun
Yanyan Sun
LSLei Shi
Lei Shi
LJLinlin Jiang
Linlin Jiang
YLYunlei Li
Yunlei Li
Jilan ChenJilan Chen
Jilan Chen
Crossbreeding advantage in hybrids compared with their parents, termed heterosis, has been exhaustively exploited in chicken breeding over the last century. Reports for crossbreeding of elite laying chickens covering rearing and laying period remain infrequent. In this study, resource populations of Rhode Island Red (RIR) and White Leghorn (WL) pure-bred chickens were reciprocally crossed to generate 4 distinct groups that were evaluated for prelaying growth, egg production, and egg quality. Birds monitored for prelaying growth consists of 105 (RIR), 131 (WL), 207 (RIR × WL) and 229 (WL × RIR), and 30 pullets from each group were evaluated. Egg laying records were collected from 102, 89, 147, and 191 hens in the 4 populations, respectively. In addition, expression of 5 candidate genes for egg production in the ovarian follicles was measured by RT-qPCR. Results showed that BW of hatched chicks in the WL line was higher than the other populations. However, the 2 crossbreds grew faster than WL purebred throughout the prelaying period. Low to medium heterosis was observed for BW and body length before the onset of lay. White Leghorn and the hybrids commenced laying earlier than RIR pullets and egg production traits were favorable in the crossbreds compared with purebreds. Heterosis for egg number and clutch size was moderate in WL × RIR but low in RIR × WL hens. Expression of antimullerian hormone gene was high in WL and RIR × WL hybrids, suggesting WL parent-specific enhancing dominant expression. Shell weight was higher in the crossbreds than purebreds at 52 wk of age, but RIR hens laid eggs with higher shell ratio than the other populations (P < 0.05). Conversely, WL and the hybrids had higher eggshell strength than RIR birds (P < 0.05). Eggshell strength was the only egg quality trait that showed heterosis above 10% in WL × RIR hybrids at 32 and 52 wk of age. White Leghorn × RIR hens demonstrated higher percent heterosis for economic traits than birds of the reciprocal hybrid. This means that RIR breed is a better dam than a sire line for growth, egg laying, and egg quality traits.

1 June 2023 in Animal Bioscience
Verified
Journal Article
Open access
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LSLei Shi
Lei Shi
YLYunlei Li
Yunlei Li
AIAdamu Mani Isa
Adamu Mani Isa
HMHui Ma
Hui Ma
JYJingwei Yuan
Jingwei Yuan
YSYanyan Sun
Yanyan Sun
Objective: The better understanding of laying pattern of birds is crucial for developing breed-specific proper breeding scheme and management.Methods: Daily egg production until 50 wk of age of six chicken breeds including one layer (White Leghorn, WL), three dual-purpose (Rhode Island Red, RIR; Columbian Plymouth Rock, CR; and Barred Plymouth Rock, BR), one synthetic dwarf (DY), and one indigenous (Beijing-You Chicken, BYC) were used to characterize their clutch traits and egg production. The age at first egg, egg number, average and maximum clutch length, pause length, and number of clutches and pauses were calculated accordingly.Results: The egg number and average clutch length in WL, RIR, CR, and BR were higher than those in DY and BYC (p<0.01). The numbers of clutches and pauses, and pause length in WL, RIR, CR, and BR were lower than those in DY and BYC (p<0.01). The coefficient variations of clutch length in WL, RIR, CR, and BR (57.66%, 66.49%, 64.22%, and 55.35%, respectively) were higher than DY (41.84%) and BYC (36.29%), while the coefficient variations of egg number in WL, RIR, CR, and BR (9.10%, 9.97%, 10.82%, and 9.92%) were lower than DY (15.84%) and BYC (16.85%). The clutch length was positively correlated with egg number (r = 0.51 to 0.66; p<0.01), but not correlated with age at first egg in all breeds.Conclusion: The six breeds showed significant different clutch and egg production traits. Due to the selection history, the high and median productive layer breeds had higher clutch length than those of the less productive indigenous BYC. The clutch length is a proper selection criterion for further progress in egg production. The age at first egg, which is independent of clutch traits, is especially encouraged to be improved by selection in the BYC breed.

17 February 2020 in Genes
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Journal Article
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HMHui Ma
Hui Ma
ANAixin Ni
Aixin Ni
PGPingzhuang Ge
Pingzhuang Ge
YLYunlei Li
Yunlei Li
LSLei Shi
Lei Shi
Jilan ChenJilan Chen
Jilan Chen
Pigeons have the ability to produce milk and feed their squabs. The genetic mechanisms underlying milk production in the crops of ’lactating’ pigeons are not fully understood. In this study, RNA sequencing was employed to profile the transcriptome of lncRNA and mRNA in lactating and non-‘lactating’ pigeon crops. We identified 7066 known and 17,085 novel lncRNAs. Of these lncRNAs, 6166 were differentially expressed. Among the 15,138 mRNAs detected, 6483 were differentially expressed, including many predominant genes with known functions in the milk production of mammals. A GO annotation analysis revealed that these genes were significantly enriched in 55, 65, and 30 pathways of biological processes, cellular components, and molecular functions, respectively. A KEGG pathway enrichment analysis revealed that 12 pathways (involving 544 genes), including the biosynthesis of amino acids, the propanoate metabolism, the carbon metabolism and the cell cycle, were significantly enriched. The results provide fundamental evidence for the better understanding of lncRNAs’ and differentially expressed genes’ (DEGs) regulatory role in the molecular pathways governing milk production in pigeon crops. To our knowledge, this is the first genome-wide investigation of the lncRNAs in pigeon crop associated with milk production. This study provided valuable resources for differentially expressed lncRNAs and mRNAs, improving our understanding of the molecular mechanism of pigeon milk production.

6 October 2023 in Genetics Selection Evolution
Verified
Journal Article
Open access
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JYJingwei Yuan
Jingwei Yuan
JZJinmeng Zhao
Jinmeng Zhao
YSYanyan Sun
Yanyan Sun
YWYuanmei Wang
Yuanmei Wang
YLYunlei Li
Yunlei Li
Jilan ChenJilan Chen
Jilan Chen
Background: Heterosis is routinely exploited to improve animal performance. However, heterosis and its underlying molecular mechanism for feed intake and efficiency have been rarely explored in chickens. Feed efficiency continues to be an important breeding goal trait since feed accounts for 60 to 70% of the total production costs in poultry. Here, we profiled the mRNA-lncRNA landscape of 96 samples of the hypothalamus, liver and duodenum mucosa from White Leghorn (WL), Beijing-You chicken (YY), and their reciprocal crosses (WY and YW) to elucidate the regulatory mechanisms of heterosis. Results: We observed negative heterosis for both feed intake and residual feed intake (RFI) in YW during the laying period from 43 to 46 weeks of age. Analysis of the global expression pattern showed that non-additivity was a major component of the inheritance of gene expression in the three tissues for YW but not for WY. The YW-specific non-additively expressed genes (YWG) and lncRNA (YWL) dominated the total number of non-additively expressed genes and lncRNA in the hypothalamus and duodenum mucosa. Enrichment analysis of YWG showed that mitochondria components and oxidation phosphorylation (OXPHOS) pathways were shared among the three tissues. The OXPHOS pathway was enriched by target genes for YWL with non-additive inheritance of expression in the liver and duodenum mucosa. Weighted gene co-expression network analysis revealed divergent co-expression modules associated with feed intake and RFI in the three tissues from WL, YW, and YY. Among the negatively related modules, the OXPHOS pathway was enriched by hub genes in the three tissues, which supports the critical role of oxidative phosphorylation. Furthermore, protein quantification of ATP5I was highly consistent with ATP5I expression in the liver, which suggests that, in crossbred YW, non-additive gene expression is down-regulated and decreases ATP production through oxidative phosphorylation, resulting in negative heterosis for feed intake and efficiency. Conclusions: Our results demonstrate that non-additively expressed genes and lncRNA involved in oxidative phosphorylation in the hypothalamus, liver, and duodenum mucosa are key regulators of the negative heterosis for feed intake and RFI in layer chickens. These findings should facilitate the rational choice of suitable parents for producing crossbred chickens.

15 March 2024 in Poultry Science
Verified
Journal Article
Open access
EHEr-Ying Hao
Er-Ying Hao
XLXuelu Liu
Xuelu Liu
XCXiang-Yu Chen
Xiang-Yu Chen
HXHan Xue
Han Xue
BSBo-Fei Su
Bo-Fei Su
HCHui Chen
Hui Chen
Follicular atresia in chickens reduces the number of follicles that can further develop, leading to decrease egg laying. Endoplasmic reticulum stress (ERS) can initiate a unique pathway inducing the apoptosis of follicular granulosa cells, thus reducing egg laying. Melatonin (MEL) is involved in the regulation of follicle development, ovulation, and oocyte maturation, and is closely related to follicle fate. Mammalian target of Rapamycin (mTOR) signaling pathway plays an important role in cell growth regulation, and that there is a possible crosstalk between melatonin and mTOR activity in granular cells maturation and ovulation. This study aimed to investigate whether MEL inhibits ERS and follicular granulosa cell apoptosis by regulating ATF4 to activate mTOR signaling pathway in chickens. Frist, we established an in vitro ERS cell model using tunicamycin (TM). The results showed that different concentrations of TM exhibited dose-dependent inhibition of cell activity and induction of granulosa cells (P<0.01). Therefore, we chose 5 µg/mL of TM and a treatment time for 6 h as the optimal concentration for the following experiments. Then we investigate whether melatonin can inhibit ERS. TM treatment decreased the cell viability and Bcl-2 expression, increasing ROS levels and the mRNA expression of Grp78, ATF4, CHOP, PERK, eIF-2α, and BAX (P<0.01), whereas TM+MEL treatment significantly inhibited these changes (P<0.01). Then we explored whether melatonin protects follicular granulosa cells from ERS-induced apoptosis through the mammalian target of rapamycin (mTOR) signaling pathway by regulating ATF4, we found that ATF4 knockdown inhibited ERS by decreasing the expression of ERS-related genes and proteins and activating mTOR signaling pathway by increasing the protein expression of p4E-BP1 and pT389-S6K (P<0.001), while these changes were promoted by TM+si-ATF4+MEL treatment (P<0.01). These results indicate that MEL could alleviate TM-induced ERS by regulating ATF4 to activate mTOR signaling pathway in follicular granulosa cells, thus providing a new perspective for prolonging the laying cycle in chickens.