Francesca Cutrupi

Francesca Cutrupi

orcid

Research Focus & Metrics

Academic Career Length

6Years (2021-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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18 March 2024 in Frontiers in Water
Verified
Journal Article
Open access
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FCFrancesca Cutrupi
Francesca Cutrupi
AOAdriana Osińska
Adriana Osińska
IRIftita Rahmatika
Iftita Rahmatika
JAJuwon Samuel Afolayan
Juwon Samuel Afolayan
YVYulija Vystavna
Yulija Vystavna
WMWindi Muziasari
Windi Muziasari
The global threat of antimicrobial resistance (AMR) is now increasingly recognized for the danger posed by its environmental spread. Aquatic environments and wastewater represent a significant diffusion and selection pathway for antibiotic resistance genes and antibiotic resistant bacteria (ARGs and ARBs). During a collaborative hackathon event, the “Innovation Workshop on Water Quality Monitoring & Assessment,” held in September 2023, experts addressed four challenges related to water quality, including the challenge of globalization AMR surveillance in water. This paper, derived from the workshop findings, proposes a globally adaptable model for antimicrobial resistance surveillance intended as an advance to improve future monitoring systems. The new framework aims to address significant challenges, such as the lack of standardized methodological approaches or lack of funding, coordination, and awareness across a short-, medium- and long-term plan, integrating sustainability concepts, extending participation and monitoring capacity of countries, and offering efficient solutions. This vision is first articulated by creating a technical committee that promotes awareness of antimicrobial resistance and develops a single data management and communication platform. Subsequently, by developing local, national, and international policies, centralized laboratories will be established at the regional level, and built based on existing realities. These laboratories will include facilities to make the management of analyses more efficient, from sampling to reporting the final result. In the long term, activities that allow the maintenance of the created framework and continuous technological development and advancement will be promoted. All this will be achieved in collaboration with national and supranational bodies that are already addressing the issue at a global level.

21 September 2023 in Environmental Science and Pollution Research
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Journal Article
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FCFrancesca Cutrupi
Francesca Cutrupi
MRMichele Rossi
Michele Rossi
MCMaria Cadonna
Maria Cadonna
EPElisa Poznanski
Elisa Poznanski
SMSerena Manara
Serena Manara
EGElena Grasselli
Elena Grasselli
Crucial information on the pandemic’s spread has been gathered by monitoring the trend of SARS-CoV-2 in wastewater. This surveillance has highlighted that the initial concentration is a critical step of the analytical procedure due to the low viral titer that may be present in this matrix. This paper presents the results of the evaluation of two different wastewater concentration protocols to determine the most efficient and cost-effective. The two methods tested were the following: (a) a biphasic separation system with PEG-dextran and (b) a PEG/NaCl precipitation protocol. Other aspects of the detection method were also investigated including the influence of storage temperature on virus recovery and the heat treatment of pasteurization, which aims to make samples safer for operators and the environment. The PEG/NaCl precipitation method was found to perform better than the biphasic separation system, allowing for more sensitive identification of the presence of the virus and the detection of a higher viral titer than that identified with the biphasic separation in all results. Storage of the samples at 4.3±0.2°C for up to 3 weeks did not adversely affect the virus titer and the pasteurization pre-treatment increases operator safety and maintains the identification of the viral concentration. Graphical abstract

27 October 2021 in Water Science & Technology
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Journal Article
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FCFrancesca Cutrupi
Francesca Cutrupi
MCM. Cadonna
M. Cadonna
SMSerena Manara
Serena Manara
Paola FoladoriPaola Foladori
Paola Foladori
Several studies have detected SARS-CoV-2 in the stool of infected people as in urban wastewater. The quantification of SARS-CoV-2 in wastewater appears today as a powerful tool that can help in wastewater-based epidemiology (WBE). The goal is to improve the prediction of new waves of COVID-19 outbreaks and provide an early warning of the evolution of the infection. In this research, we highlighted some practical and scientific aspects that emerged during an extensive ongoing monitoring campaign carried out on a large number of wastewater treatment plants located in the province of Trento (North Italy) and aimed at the detection of SARS-CoV-2 in raw municipal wastewater. The open issues underline are related to the collection and storage (sampling protocol, storage and heat treatment), to the molecular analysis (enrichment phase), and to the mathematical calculation of SARS-CoV-2 load in wastewater, suitable for WBE (standard curve to obtain the concentration of genomic units and flow rate measurements). This study provides some insights that can help in the implementation of surveillance plans in other regions.

18 October 2025 in Pathogens
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Journal Article
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IFIrene Falco
Irene Falco
Ana AllendeAna Allende
Ana Allende
FCFrancesca Cutrupi
Francesca Cutrupi
RARosa Aznar
Rosa Aznar
Gloria SanchezGloria Sanchez
Gloria Sanchez
PTPilar Truchado
Pilar Truchado
Antimicrobial resistance poses a growing threat to public health, and integrated surveillance strategies across environmental compartments such as treated wastewater and biosolids can substantially improve monitoring efforts. A key challenge is the diversity of available protocols, which complicates comparability for the concentration and detection of antibiotic resistance genes (ARGs), particularly in complex matrices. In this study, we compared two commonly used concentration methods—filtration–centrifugation (FC) and aluminum-based precipitation (AP)—and two detection techniques, quantitative PCR (qPCR) and droplet digital PCR (ddPCR), for the quantification of four clinically relevant ARGs: tet(A), blaCTX-M group 1, qnrB, and catI. Analyses were performed in both secondary treated wastewater and biosolid samples, including their purified bacteriophage-associated DNA fractions. Results showed that the AP method provided higher ARG concentrations than FC, particularly in wastewater samples. ddPCR demonstrated greater sensitivity than qPCR in wastewater, whereas in biosolids, both methods performed similarly, although ddPCR yielded weaker detection. Importantly, ARGs were detected in the phage fraction of both matrices, with ddPCR generally offering higher detection levels. These results provide comparative insights into established methodologies and highlight the value of selecting appropriate protocols based on matrix characteristics and surveillance objectives.

3 November 2026 in Viruses
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Journal Article
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MCMaria Cadonna
Maria Cadonna
MPMattia Postinghel
Mattia Postinghel
ATAlessia Torboli
Alessia Torboli
PFPirous Fateh-Moghadam
Pirous Fateh-Moghadam
FCFrancesca Cutrupi
Francesca Cutrupi
Paola FoladoriPaola Foladori
Paola Foladori
Given worldwide advances in wastewater-based epidemiology (WBE), its implementation is also emerging in international sporting events. The WBE application to a major international sporting event held under winter and cold-climate conditions remains unexplored. The Milano-Cortina 2026 Winter Olympic and Paralympic Games, hosted in the Alpine region, provided a unique opportunity to explore the potential of wastewater surveillance during the winter period, when seasonal diseases also drive pathogen circulation. This paper presents the results of the WBE surveillance conducted in the Province of Trento, over six months (November 2025-April 2026) and covering the periods before, during, and after the Winter Olympic and Paralympic Games. A total of 96 wastewater samples were collected from six wastewater treatment plants (WWTPs) serving the Fiemme and Fassa valleys, with a total census population of about 29,000 but reaching 143,000 population equivalents during tourist periods. The WBE monitoring involved quantitative analyses of SARS-CoV-2, influenza A/B, RSV A/B, and Norovirus GI/GII, as well as screening for measles. Norovirus GI/GII and RSV A/B circulated as the number of event-related visitors increased, whereas SARS-CoV-2 and influenza viruses remained at background or seasonal levels. Clinical surveillance data in the Province of Trento effectively complemented this multi-pathogen WBE. In conclusion, this experience provided non-invasive, community-wide information and demonstrated the operational feasibility and usefulness of WBE as a multi-pathogen sentinel tool for situational awareness to complement public health surveillance.