Yun Shi

Dr. Yun Shi

orcid

Research Focus & Metrics

Academic Career Length

10Years (2017-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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11 November 2020 in Journal of Muscle Research and Cell Motility
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Journal Article
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TRTyler Robert Reinoso
Tyler Robert Reinoso
Maicon Landim-VieiraMaicon Landim-Vieira
Maicon Landim-Vieira
YSYun Shi
Yun Shi
JJJamie Johnston
Jamie Johnston
PCP. Bryant Chase
P. Bryant Chase
HTHanna Tadros
Hanna Tadros

26 June 2017 in Scientific Reports
Verified
Journal Article
Open access
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LLLizhi Leng
Lizhi Leng
QOQi Ouyang
Qi Ouyang
XKXiangyi Kong
Xiangyi Kong
FGFei Gong
Fei Gong
CLChangfu Lu
Changfu Lu
GLGe Lin
Ge Lin
A diploid genome is necessary for normal mammalian development, thus haploid parthenogenetic embryos undergo frequent self-diploidization during preimplantation development; however, the underlying mechanism is unclear. In this study, time-lapse recording revealed that human haploid parthenotes (HPs) undergo self-diploidization via failed cytokinesis (FC) and endomitosis (EM). The frequencies of FC/EM were significantly higher in HPs than in normal fertilized embryos (26.3% vs. 1.6%, P < 0.01; 19.7% vs. 0, P < 0.01), and above 90% of FC/EM occurred at the first cell cycle in HPs. Fluorescent in situ hybridization of chromosome 16,18 and X in HPs identified diploid recovery after the appearance of FC/EM, and FC/EM HPs showed improved blastocyst formation compared with non-FC/EM HPs (18.8% and 40.0% vs. 15.4%, P > 0.05). In 66.7% of the 1-cell stage HPs, furrow ingression was not observed during the time for normal cleavage, and both immunostaining and gene expression analysis of 1-cell stage HPs revealed the absence or down-regulation of several key genes of the Rho pathway, which regulates cytomitosis. Our results suggested that the major mechanism for self-diploidization is Rho pathway inhibition leading to FC/EM in the first cell cycle, and fine-tuning of this signalling pathway may help to generate stable haploid embryos for stem cell biology studies.

Verified
Journal Article
Open access
PDF file
RWRobert Woodbury Wiseman
Robert Woodbury Wiseman
CBCaleb Micah Brown
Caleb Micah Brown
TBThomas Wesley Beck
Thomas Wesley Beck
Jeffrey BraultJeffrey Brault
Jeffrey Brault
TRTyler Robert Reinoso
Tyler Robert Reinoso
PCP. Bryant Chase
P. Bryant Chase
In this report, we establish a straightforward method for estimating the equilibrium constant for the creatine kinase reaction (CK Keq″) over wide but physiologically and experimentally relevant ranges of pH, Mg2+ and temperature. Our empirical formula for CK Keq″ is based on experimental measurements. It can be used to estimate [ADP] when [ADP] is below the resolution of experimental measurements, a typical situation because [ADP] is on the order of micromolar concentrations in living cells and may be much lower in many in vitro experiments. Accurate prediction of [ADP] is essential for in vivo studies of cellular energetics and metabolism and for in vitro studies of ATP-dependent enzyme function under near-physiological conditions. With [ADP], we were able to obtain improved estimates of ΔGATP, necessitating the reinvestigation of previously reported ADP- and ΔGATP-dependent processes. Application to actomyosin force generation in muscle provides support for the hypothesis that, when [Pi] varies and pH is not altered, the maximum Ca2+-activated isometric force depends on ΔGATP in both living and permeabilized muscle preparations. Further analysis of the pH studies introduces a novel hypothesis around the role of submicromolar ADP in force generation.

3 June 2018 in Andrologia
Verified
Journal Article
Closed access
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YGYi-Fan Gu
Yi-Fan Gu
QZQin-Wei Zhou
Qin-Wei Zhou
SZShuo-Ping Zhang
Shuo-Ping Zhang
CLChang-Fu Lu
Chang-Fu Lu
FGFei Gong
Fei Gong
GLGe Lin
Ge Lin

1 June 2021 in Journal of Muscle Research and Cell Motility
Verified
Journal Article
Closed access
PDF file
YSYun Shi
Yun Shi
JBJulia P. Bethea
Julia P. Bethea
HHHannah L. Hetzel-Ebben
Hannah L. Hetzel-Ebben
Maicon Landim-VieiraMaicon Landim-Vieira
Maicon Landim-Vieira
RMRoss J. Mayper
Ross J. Mayper
PCP. Bryant Chase
P. Bryant Chase

24 August 2023 in Preprints.org
Verified
Preprint
Open access
PDF file
RWRobert Woodbury Wiseman
Robert Woodbury Wiseman
CBCaleb Micah Brown
Caleb Micah Brown
TBThomas Wesley Beck
Thomas Wesley Beck
Jeffrey BraultJeffrey Brault
Jeffrey Brault
TRTyler Robert Reinoso
Tyler Robert Reinoso
PCP. Bryant Chase
P. Bryant Chase
In this report, we establish a straightforward method for estimating the equilibrium constant for the CK reaction over wide but physiologically and experimentally relevant ranges of pH, Mg2+ and temperature. Our empirical formula for CK Keq” is based on experimental measurements. It can be used to estimate [ADP] when [ADP] is below the resolution of experimental measurements, a typical situation because [ADP] is on the order of micromolar concentrations in living cells, and may be much lower in many in vitro experiments. Accurate prediction of [ADP] is essential for in vivo studies of cellular energetics and metabolism, and for in vitro studies of ATP-dependent enzyme function under near-physiological conditions. With [ADP], we could estimate ΔGATP. Application to actomyosin force generation in muscle provides support for the hypothesis that, when [Pi] varies but not when pH is altered, maximum Ca2+-activated isometric force depends on ΔGATP in both living and permeabilized muscle preparations. Further analysis of the pH studies introduces a novel hypothesis for the role of submicromolar ADP in force generation.