Irine Viktorovna Podoprigora

Prof. Irine Viktorovna Podoprigora


Research Focus & Metrics

Academic Career Length

18Years (2009-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
1 August 2009 in Bulletin of Experimental Biology and Medicine
Verified
Journal Article
Closed access
PDF file
Nadezhda SachivkinaNadezhda Sachivkina
Nadezhda Sachivkina
EKE. G. Kravtsov
E. G. Kravtsov
EVE. A. Vasilyeva
E. A. Vasilyeva
IPIrine Viktorovna Podoprigora
Irine Viktorovna Podoprigora
MDM. V. Dalin
M. V. Dalin

24 June 2014 in Bulletin of Experimental Biology and Medicine
Verified
Journal Article
Closed access
PDF file
EKE. G. Kravtsov
E. G. Kravtsov
IPIrine Viktorovna Podoprigora
Irine Viktorovna Podoprigora
YRYa. A. Rybas
Ya. A. Rybas
Nadezhda SachivkinaNadezhda Sachivkina
Nadezhda Sachivkina
AEA. V. Ermolaev
A. V. Ermolaev
SBS. B. Brodskaya
S. B. Brodskaya

Verified
Journal Article
Open access
PDF file
Peter V. EvseevPeter V. Evseev
Peter V. Evseev
IPIrine Viktorovna Podoprigora
Irine Viktorovna Podoprigora
ACAndrei Viktorovich Chaplin
Andrei Viktorovich Chaplin
ZKZurab Khabadze
Zurab Khabadze
AMArtem Malkov
Artem Malkov
BEBoris Efimov
Boris Efimov
Bulleidia extructa strain PP_925, isolated from the periodontal pocket of a patient with periodontitis, is a Gram-positive Bacillota with an unusually compact genome of 1.38 Mb. Phylogenomic analyses place PP_925 within Erysipelotrichales and show close relatedness of Bulleidia to Solobacterium and Lactimicrobium, as well as the existence of previously undescribed related clades. The metabolic repertoire of PP_925 is strongly reduced: it retains glycolysis, the phosphotransacetylase–acetate kinase pathway, and arginine catabolism but lacks the tricarboxylic acid cycle and most de novo biosynthetic pathways for amino acids, nucleotides, fatty acids, cofactors, and vitamins, implying reliance on salvage and cross-feeding. Phylogenetic inference indicates independent peptidoglycan losses in multiple mycoplasma Erysipelotrichia-related lineages, while PP_925 has retained an ancestral Gram-positive cell wall despite extensive genomic reduction. The genome preserves systems crucial for host interaction and adaptability, including a horizontally acquired tad locus encoding type IV pili, a comG competence system, and several adherence-associated virulence factors. Defense mechanisms are diverse and include a CRISPR-Cas II-A system, a type II restriction–modification module adjacent to Gao_Qat-like genes, and the Wadjet system in a genome without prophages; CRISPR spacers indicate repeated encounters with Bacillota phages. Comparative genomics of PP_925 and related strains reveals a small core genome with lineage-specific adhesion and defense modules, indicating recent shared ancestry combined with adaptive flexibility under substantial genome reduction.

17 November 2011 in Bulletin of Experimental Biology and Medicine
Verified
Journal Article
Closed access
PDF file
IPIrine Viktorovna Podoprigora
Irine Viktorovna Podoprigora
EKE. G. Kravtsov
E. G. Kravtsov
Nadezhda SachivkinaNadezhda Sachivkina
Nadezhda Sachivkina
NYN. V. Yashina
N. V. Yashina
MDM. V. Dalin
M. V. Dalin
OSO. A. Semkina
O. A. Semkina