Human C-reactive protein (CRP) is a classical, acute phase serum protein synthesized by the liver in response to infection, inflammation, or trauma. CRP binds to microbial antigens and damaged cells, opsonizes particles for phagocytosis and regulates the inflammatory response by the induction of cytokine synthesis. These activities of CRP depend on its ability to activate complement and to bind to Fcgamma receptors (FcgammaR). The goal of this study was to elucidate amino acid residues important for the interaction of CRP with human FcgammaRI (CD64) and FcgammaRIIa (CD32). Several mutations of the CRP structure were studied based on the published crystal structure of CRP. Mutant and wild-type recombinant CRP molecules were expressed in the baculovirus system and their interactions with FcgammaR and C1q were determined. A previous study by our laboratory identified an amino acid position, Leu(176), critical for CRP binding to FcgammaRI and work by others (Agrawal, A., Shrive, A. K., Greenhough, T. J., and Volanakis, J. E. (2001) J. Immunol. 166, 3998-4004) determined several residues important for C1q binding. The amino acid residues important to CRP binding to FcgammaRIIa were previously unknown. This study newly identifies residues Thr(173) and Asn(186) as important for the binding of CRP to FcgammaRIIa and FcgammaRI. Lys(114), like Leu(176), was implicated in binding to FcgammaRI, but not FcgammaRIIa. Single mutations at amino acid positions Lys(114), Asp(169), Thr(173), Tyr(175), and Leu(176) affected C1q binding to CRP. These results further identify amino acids involved in the binding sites on CRP for FcgammaRI, FcgammaRIIa, and C1q and indicate that these sites are overlapping.

Shark skin has been shown to reduce drag in turbulent boundary layer flows, but the flow control mechanisms by which it does so are not well understood. Drag reduction has generally been attributed to static effects of scale surface morphology, but possible drag reduction effects of passive or active scale actuation, or ‘bristling’, have been recognized more recently. Here, we provide the first direct documentation of passive scale bristling due to reversing, turbulent boundary layer flows. We recorded and analysed high-speed videos of flow over the skin of a shortfin mako shark,Isurus oxyrinchus. These videos revealed rapid scale bristling events with mean durations of approximately 2 ms. Passive bristling occurred under flow conditions representative of cruise swimming speeds and was associated with two flow features. The first was a downward backflow that pushed a scale-up from below. The second was a vortex just upstream of the scale that created a negative pressure region, which pulled up a scale without requiring backflow. Both flow conditions initiated bristling at lower velocities than those required for a straight backflow. These results provide further support for the role of shark scale bristling in drag reduction.

Escape swimming is a crucial behavior by which undulatory swimmers evade potential threats. The hydrodynamics of escape swimming have not been well studied, particularly for anguilliform swimmers, such as the sea lamprey Petromyzon marinus. For this study, we compared the kinematics and hydrodynamics of larval sea lampreys with those of lampreys accelerating from rest during escape swimming. We used experimentally derived velocity fields to calculate pressure fields and distributions of thrust and drag along the body. Lampreys initiated acceleration from rest with the formation of a high-amplitude body bend at approximately one-quarter body length posterior to the head. This deep body bend produced two high-pressure regions from which the majority of thrust for acceleration was derived. In contrast, steady swimming was characterized by shallower body bends and negative-pressure-derived thrust, which was strongest near the tail. The distinct mechanisms used for steady swimming and acceleration from rest may reflect the differing demands of the two behaviors. High-pressure-based mechanisms, such as the one used for acceleration from rest, could also be important for low-speed maneuvering during which drag-based turning mechanisms are less effective. The design of swimming robots may benefit from the incorporation of such insights from unsteady swimming.

Eel-like fish can exhibit efficient swimming with comparatively low metabolic cost by utilizing sub-ambient pressure areas in the trough of body waves to generate thrust, effectively pulling themselves through the surrounding water. While this is understood at the fish’s preferred swimming speed, little is known about the mechanism over a full range of natural swimming speeds. We compared the swimming kinematics, hydrodynamics, and metabolic activity of juvenile coral catfish (Plotosus lineatus) across relative swimming speeds spanning two orders of magnitude from 0.2 to 2.0 body lengths (BL) per second. We used experimentally derived velocity fields to compute pressure fields and components of thrust along the body. At low speeds, thrust was primarily generated through positive pressure pushing forces. In contrast, increasing swimming speeds caused a shift in the recruitment of push and pull propulsive forces whereby sub-ambient pressure gradients contributed up to 87% of the total thrust produced during one tail-beat cycle past 0.5 BL s⁻¹. This shift in thrust production corresponded to a sharp decline in the overall cost of transport and suggests that pull-dominated thrust in anguilliform swimmers is subject to a minimum threshold below which drag-based mechanisms are less effective.

A diatom's sinking speed affects its depth in the water column, which determines its access to light and nutrients. Some large, centric diatom species perform an unsteady sinking behavior in which a cell's sinking speed oscillates over more than an order of magnitude on time scales of seconds. Diatoms are known to decrease mean sinking speeds and the magnitude of unsteady sinking following exposure to nutrient replete conditions over hours to days. Here we show that on shorter time scales of minutes to hours, nutrient deprived Coscinodiscus wailesii cells increase the mean and unsteadiness of their sinking when exposed to increased nutrient concentrations. Cultures exposed to nitrate or silicate‐depleted media followed by a spike of the missing nutrient showed a sinking speed increase within the first 2 h that declined over the next 22 h. Phosphate deprived cultures did not respond similarly to a phosphate spike. In an experiment with an artificial nutricline in which cells encountered a sharp increase in nutrient concentrations over a distance of 10 cm, mean sinking speeds increased eight fold, and sinking unsteadiness increased significantly; these sinking speed changes occurred over 33 min. The contrasting short and long‐term sinking behavior responses seen in this study demonstrates the importance of examining sinking behavior over multiple time scales. Initial fast and unsteady sinking upon encountering increasing nutrient concentrations may help diatoms take advantage of patchy nutrient distributions. Longer term, slow and steady sinking may be beneficial for maximizing light exposure and minimizing energy costs from unsteady sinking.

It has been well documented that animals (and machines) swimming or flying near a solid boundary get a boost in performance. This ground effect is often modelled as an interaction between a mirrored pair of vortices represented by a true vortex and an opposite sign ‘virtual vortex’ on the other side of the wall. However, most animals do not swim near solid surfaces and thus near body vortex–vortex interactions in open-water swimmers have been poorly investigated. In this study, we examine the most energetically efficient metazoan swimmer known to date, the jellyfishAurelia aurita, to elucidate the role that vortex interactions can play in animals that swim away from solid boundaries. We used high-speed video tracking, laser-based digital particle image velocimetry (dPIV) and an algorithm for extracting pressure fields from flow velocity vectors to quantify swimming performance and the effect of near body vortex–vortex interactions. Here, we show that a vortex ring (stopping vortex), created underneath the animal during the previous swim cycle, is critical for increasing propulsive performance. This well-positioned stopping vortex acts in the same way as a virtual vortex during wall-effect performance enhancement, by helping converge fluid at the underside of the propulsive surface and generating significantly higher pressures which result in greater thrust. These findings advocate that jellyfish can generate a wall-effect boost in open water by creating what amounts to a ‘virtual wall’ between two real, opposite sign vortex rings. This explains the significant propulsive advantage jellyfish possess over other metazoans and represents important implications for bio-engineered propulsion systems.