Tuomas Knowles

Prof. Dr. Tuomas Knowles

University of Cambridge

Research Focus & Metrics

Academic Career Length

21Years (2006-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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23 May 2014 in Nature Reviews Molecular Cell Biology
Verified
Journal Article
Closed access
Tuomas KnowlesTuomas Knowles
Tuomas Knowles
Michele VendruscoloMichele Vendruscolo
Michele Vendruscolo
CDChristopher M. Dobson
Christopher M. Dobson

23 May 2013 in Proceedings of the National Academy of Sciences
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Journal Article
Closed access
SCSamuel I. A. Cohen
Samuel I. A. Cohen
SLSara Linse
Sara Linse
LLLeila M. Luheshi
Leila M. Luheshi
EHErik Hellstrand
Erik Hellstrand
DWDuncan A. White
Duncan A. White
Tuomas KnowlesTuomas Knowles
Tuomas Knowles
The generation of toxic oligomers during the aggregation of the amyloid-β (Aβ) peptide Aβ42 into amyloid fibrils and plaques has emerged as a central feature of the onset and progression of Alzheimer’s disease, but the molecular pathways that control pathological aggregation have proved challenging to identify. Here, we use a combination of kinetic studies, selective radiolabeling experiments, and cell viability assays to detect directly the rates of formation of both fibrils and oligomers and the resulting cytotoxic effects. Our results show that once a small but critical concentration of amyloid fibrils has accumulated, the toxic oligomeric species are predominantly formed from monomeric peptide molecules through a fibril-catalyzed secondary nucleation reaction, rather than through a classical mechanism of homogeneous primary nucleation. This catalytic mechanism couples together the growth of insoluble amyloid fibrils and the generation of diffusible oligomeric aggregates that are implicated as neurotoxic agents in Alzheimer’s disease. These results reveal that the aggregation of Aβ42 is promoted by a positive feedback loop that originates from the interactions between the monomeric and fibrillar forms of this peptide. Our findings bring together the main molecular species implicated in the Aβ aggregation cascade and suggest that perturbation of the secondary nucleation pathway identified in this study could be an effective strategy to control the proliferation of neurotoxic Aβ42 oligomers.

11 December 2009 in Science
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Journal Article
Closed access
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Tuomas KnowlesTuomas Knowles
Tuomas Knowles
CWChristopher A. Waudby
Christopher A. Waudby
GDGlyn L. Devlin
Glyn L. Devlin
SCSamuel I. A. Cohen
Samuel I. A. Cohen
AAAdriano Aguzzi
Adriano Aguzzi
CDChristopher M. Dobson
Christopher M. Dobson
Dissecting Amyloid Formation: Amyloid fibrils are associated with clinical disorders ranging from Alzheimer's disease to type II diabetes. Their self-assembly can be described by a master equation that takes into account nucleation-dependent polymerization and fragmentation. Knowles et al. (p. 1533 ) now present an analytical solution to the master equation, which shows that amyloid growth kinetics is often limited by the fragmentation rate rather than by the rate of primary nucleation. In addition, the results reveal relationships between system properties (scaling laws) that provide mechanistic insight not only into amyloid growth, but also into related self-assembly processes.

1 April 2018 in Cell
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Journal Article
Open access
SQSeema Qamar
Seema Qamar
GWGuoZhen Wang
GuoZhen Wang
SRSuzanne J. Randle
Suzanne J. Randle
FRFrancesco Simone Ruggeri
Francesco Simone Ruggeri
JVJuan A. Varela
Juan A. Varela
PGPeter St George-Hyslop
Peter St George-Hyslop
Reversible phase separation underpins the role of FUS in ribonucleoprotein granules and other membrane-free organelles and is, in part, driven by the intrinsically disordered low-complexity (LC) domain of FUS. Here, we report that cooperative cation-π interactions between tyrosines in the LC domain and arginines in structured C-terminal domains also contribute to phase separation. These interactions are modulated by post-translational arginine methylation, wherein arginine hypomethylation strongly promotes phase separation and gelation. Indeed, significant hypomethylation, which occurs in FUS-associated frontotemporal lobar degeneration (FTLD), induces FUS condensation into stable intermolecular β-sheet-rich hydrogels that disrupt RNP granule function and impair new protein synthesis in neuron terminals. We show that transportin acts as a physiological molecular chaperone of FUS in neuron terminals, reducing phase separation and gelation of methylated and hypomethylated FUS and rescuing protein synthesis. These results demonstrate how FUS condensation is physiologically regulated and how perturbations in these mechanisms can lead to disease.

1 May 2012 in Cell
Verified
Journal Article
Open access
NCNunilo Cremades
Nunilo Cremades
SCSamuel I.A. Cohen
Samuel I.A. Cohen
EDEmma Deas
Emma Deas
AAANDREY Abramov
ANDREY Abramov
ACAllen Y. Chen
Allen Y. Chen
DKDavid Klenerman
David Klenerman
Here, we use single-molecule techniques to study the aggregation of α-synuclein, the protein whose misfolding and deposition is associated with Parkinson's disease. We identify a conformational change from the initially formed oligomers to stable, more compact proteinase-K-resistant oligomers as the key step that leads ultimately to fibril formation. The oligomers formed as a result of the structural conversion generate much higher levels of oxidative stress in rat primary neurons than do the oligomers formed initially, showing that they are more damaging to cells. The structural conversion is remarkably slow, indicating a high kinetic barrier for the conversion and suggesting that there is a significant period of time for the cellular protective machinery to operate and potentially for therapeutic intervention, prior to the onset of cellular damage. In the absence of added soluble protein, the assembly process is reversed and fibrils disaggregate to form stable oligomers, hence acting as a source of cytotoxic species.

15 September 2020 in Nature Reviews Chemistry
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Journal Article
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ALAviad Levin
Aviad Levin
THTuuli A. Hakala
Tuuli A. Hakala
LSLee Schnaider
Lee Schnaider
GBGonçalo J. L. Bernardes
Gonçalo J. L. Bernardes
EGEhud Gazit
Ehud Gazit
Tuomas KnowlesTuomas Knowles
Tuomas Knowles