Varvara Vadimovna Dudenkova

Dr. Varvara Vadimovna Dudenkova

orcid

Research Focus & Metrics

Academic Career Length

14Years (2013-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 September 2015 in Biochimica et Biophysica Acta (BBA) - General Subjects
Verified
Journal Article
Closed access
MSMarina Shirmanova
Marina Shirmanova
IDIrina N. Druzhkova
Irina N. Druzhkova
MLMaria M. Lukina
Maria M. Lukina
MMMikhail E. Matlashov
Mikhail E. Matlashov
VBVsevolod V. Belousov
Vsevolod V. Belousov
EZElena V. Zagaynova
Elena V. Zagaynova

28 January 2017 in Stem Cell Research & Therapy
Verified
Journal Article
Open access
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AMAleksandra V. Meleshina
Aleksandra V. Meleshina
Varvara Vadimovna DudenkovaVarvara Vadimovna Dudenkova
Varvara Vadimovna Dudenkova
AKAlena Kashirina
Alena Kashirina
DKDaria Kuznetsova
Daria Kuznetsova
MSMarina Shirmanova
Marina Shirmanova
EZElena V. Zagaynova
Elena V. Zagaynova
Metabolic plasticity and the versatility of different lineages of stem cells as they satisfy their energy demands are not completely understood. In this study we investigated the metabolic changes in mesenchymal stem cells (MSCs) undergoing differentiation in two directions, osteogenic and chondrogenic, using two-photon fluorescence microscopy combined with FLIM. Differentiation was induced by incubating the human bone marrow MSCs in osteogenic or chondrogenic mediums. Cellular metabolism was examined on the basis of the fluorescence of the metabolic cofactors NAD(P)H and FAD. The optical redox ratio (FAD/NAD(P)H) and the fluorescence lifetimes of NAD(P)H and FAD were traced using two-photon fluorescence microscopy combined with FLIM. The cells were imaged before the induction of differentiation (day 0) and on days 7, 14, and 21 of osteogenic and chondrogenic differentiation. Based on the data for the FAD/NAD(P)H redox ratio and on the fluorescence lifetimes of protein-bound NAD(P)H, we registered a metabolic shift toward a more glycolytic status in the process of MSC differentiation. The difference was that, in osteogenic differentiation, an increase in oxidative phosphorylation preceded the shift to the glycolytic status in the process of such MSC differentiation. The fluorescence lifetime characteristics of FAD indicated the stimulation of an unknown metabolic pathway, where protein-bound FAD participates. In this study, probing of the metabolic status of MSCs during osteogenic and chondrogenic differentiation was implemented for the first time with the use of optical metabolic imaging of the two cofactors - NAD(P)H and FAD. Our data suggest that biosynthetic processes, associated, presumably, with the synthesis of collagen, drive energy metabolism in differentiating cells, and promote a metabolic shift from a more oxidative to a more glycolytic state.

1 March 2017 in Biochimica et Biophysica Acta (BBA) - Molecular Cell Research
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Journal Article
Closed access
TSTatiana F. Sergeeva
Tatiana F. Sergeeva
MSMarina Shirmanova
Marina Shirmanova
OZOlga A Zlobovskaya
Olga A Zlobovskaya
AGAlena I. Gavrina
Alena I. Gavrina
Varvara Vadimovna DudenkovaVarvara Vadimovna Dudenkova
Varvara Vadimovna Dudenkova
EZElena V. Zagaynova
Elena V. Zagaynova

1 January 2019 in Biochemistry (Moscow)
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Journal Article
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Varvara Vadimovna DudenkovaVarvara Vadimovna Dudenkova
Varvara Vadimovna Dudenkova
MSM. V. Shirmanova
M. V. Shirmanova
MLM. M. Lukina
M. M. Lukina
FFF. I. Feldshtein
F. I. Feldshtein
AVA. Virkin
A. Virkin
EZE. V. Zagainova
E. V. Zagainova
Collagen is the major component of the extracellular matrix in mammals and its characteristics provide important information about the state of connective tissue. There are only few methods of...

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IDIrina Druzhkova
Irina Druzhkova
MSMarina Shirmanova
Marina Shirmanova
Nadezhda Ivanovna IgnatovaNadezhda Ivanovna Ignatova
Nadezhda Ivanovna Ignatova
Varvara Vadimovna DudenkovaVarvara Vadimovna Dudenkova
Varvara Vadimovna Dudenkova
MLMaria Lukina
Maria Lukina
Eugene SverdlovEugene Sverdlov
Eugene Sverdlov
Collagen, the main non-cellular component of the extracellular matrix (ECM), is profoundly reorganized during tumorigenesis and has a strong impact on tumor behavior. The main source of collagen in tumors is cancer-associated fibroblasts. Cancer cells can also participate in the synthesis of ECM; however, the contribution of both types of cells to collagen rearrangements during the tumor progression is far from being clear. Here, we investigated the processes of collagen biosynthesis and remodeling in parallel with the transcriptome changes during cancer cells and fibroblasts interactions. Combining immunofluorescence, RNA sequencing, and second harmonic generation microscopy, we have explored the relationships between the ratio of epithelial (E) and mesenchymal (M) components of hybrid E/M cancer cells, their ability to activate fibroblasts, and the contributions of both cell types to collagen remodeling. To this end, we studied (i) co-cultures of colorectal cancer cells and normal fibroblasts in a collagen matrix, (ii) patient-derived cancer-associated fibroblasts, and (iii) mouse xenograft models. We found that the activation of normal fibroblasts that form dense collagen networks consisting of large, highly oriented fibers depends on the difference in E/M ratio in the cancer cells. The more-epithelial cells activate the fibroblasts more strongly, which correlates with a dense and highly ordered collagen structure in tumors in vivo. The more-mesenchymal cells activate the fibroblasts to a lesser degree; on the other hand, this cell line has a higher innate collagen remodeling capacity. Normal fibroblasts activated by cancer cells contribute to the organization of the extracellular matrix in a way that is favorable for migratory potency. At the same time, in co-culture with epithelial cancer cells, the contribution of fibroblasts to the reorganization of ECM is more pronounced. Therefore, one can expect that targeting the ability of epithelial cancer cells to activate normal fibroblasts may provide a new anticancer therapeutic strategy.

3 April 2018 in Stem Cell Research & Therapy
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Journal Article
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AMAleksandra V. Meleshina
Aleksandra V. Meleshina
OROlga S. Rogovaya
Olga S. Rogovaya
Varvara Vadimovna DudenkovaVarvara Vadimovna Dudenkova
Varvara Vadimovna Dudenkova
MSMarina Sirotkina
Marina Sirotkina
MLMaria M. Lukina
Maria M. Lukina
EZElena V. Zagaynova
Elena V. Zagaynova
Despite the significant progress in the development of skin equivalents (SEs), the problem of noninvasively assessing the quality of the cell components and the collagen structure of living SEs both before and after transplantation remains. Undoubted preference is given to in vivo methods of noninvasive, label-free monitoring of the state of the SEs. Optical bioimaging methods, such as cross-polarization optical coherence tomography (CP OCT), multiphoton tomography (MPT), and fluorescence lifetime imaging microscopy (FLIM), present particular advantages for the visualization of such SEs. In this study, we simultaneously applied several visualization techniques for skin model examination. We investigated the structure and quality of dermal equivalents containing dermal papilla (DP) cells and dermal fibroblasts (FBs) using CP OCT, MPT, and FLIM. Both the energy metabolism of the cell components and the structuring of the collagen fibrils were addressed. Based on the data from the fluorescence lifetimes and the contributions of protein-bound NAD(P)H, a bias toward oxidative metabolism was indicated, for the first time, in both the DP cells and FBs on day 14 of SE cultivation. The CP OCT and MPT data also indicated that both DP cells and FBs structured the collagen gel in a similar manner. In this study, multimodal label-free imaging of the structure and quality of living dermal equivalents was implemented for the first time with the use CP OCT, MPT, and FLIM of NAD(P)H. Our data suggest that the combination of different imaging techniques provides an integrated approach to data acquisition regarding the structure and quality of dermal equivalents, minimizes the potential disadvantages of using a single method, and provides an ideal information profile for clinical and research applications.