Over the last decade interest in automated assays for 25-hydroxy-vitamin D measurement have greatly increased. The presence of different metabolites of vitamin D in the blood influences measurement of its concentration. In paediatric subjects the basic interference is due to the presence of 3-epi-25(OH)D2/D3, which despite their biological inactivity, influences the total concentration of 25(OH)D. Aim: We assessed the analytical performance and usefulness of two different assays for measurement of total 25(OH)D in children. Materials and Methods: The study was performed in blood samples taken from 100 school-children aged 9–11 years. In all serum samples 25(OH)D total concentration was measured with the use of chemilumi-nescent assay, which is known to show no cross-reactivity with 3-epi-25(OH)D, and with the use of a newly developed enzyme-immunosorbent method. Results: The mean 25(OH)D concentration in children measured with enzyme-immunosorbent assay (EIA) was significantly higher, at 28.06 ng/mL, than with the chemiluminescent assay (CLIA), at 21.13 ng/mL; < 0.0001. In children with optimal weight the average 25(OH)D was 32.93 ng/ml (EIA) and 21.5 ng/mL (CLIA) (p < 0.0001), respectively, whereas in a subgroup with overweight/obesity the mean concentra-tion of 25(OH)D was similar, at 23.2 ng/ml (EIA) and 20.76 ng/ml (CLIA) (p = 0.15). The nonparametric Spearman’s rank correlation of two methods equalled 0.47; 95%CI (0.11 to 0.60) with a significance level p < 0.0001. The calculated concordance correlation coefficient between two methods in the whole group was 0.26; 95%CI (0.17 to 0.35). In a subgroup of children with optimal body mass (N = 50) the concor-dance correlation coefficient was 0.18; 95%CI (0.06 to 0.29), whereas in children with overweight/obesity (N = 50) it was 0.44; 95%CI (0.29 to 057). Mean bias for the enzyme-immunosorbent method equalled 18.7%; +/- 1.96 SD (101.3% to -64%). Conclusions: With reference to 25(OH)D measurement in children, Spearman’s correlation coefficient indicated “moderate correlation” between the two compared methods, whereas the strength of agree-ment (concordance) between both methods was characterised as “poor”. The proper selection of assay for accurate assessment of vitamin D status in paediatric samples is necessary to avoid misdiagnosis. Over the last decade interest in automated assays for 25-hydroxy-vitamin D measurement have greatly increased. The presence of different metabolites of vitamin D in the blood influences measurement of its concentration. In paediatric subjects the basic interference is due to the presence of 3-epi-25(OH)D2/D3, which despite their biological inactivity, influences the total concentration of 25(OH)D. Aim: We assessed the analytical performance and usefulness of two different assays for measurement of total 25(OH)D in children. Materials and Methods: The study was performed in blood samples taken from 100 school-children aged 9–11 years. In all serum samples 25(OH)D total concentration was measured with the use of chemilumi-nescent assay, which is known to show no cross-reactivity with 3-epi-25(OH)D, and with the use of a newly developed enzyme-immunosorbent method. Results: The mean 25(OH)D concentration in children measured with enzyme-immunosorbent assay (EIA) was significantly higher, at 28.06 ng/mL, than with the chemiluminescent assay (CLIA), at 21.13 ng/mL; < 0.0001. In children with optimal weight the average 25(OH)D was 32.93 ng/ml (EIA) and 21.5 ng/mL (CLIA) (p < 0.0001), respectively, whereas in a subgroup with overweight/obesity the mean concentra-tion of 25(OH)D was similar, at 23.2 ng/ml (EIA) and 20.76 ng/ml (CLIA) (p = 0.15). The nonparametric Spearman’s rank correlation of two methods equalled 0.47; 95%CI (0.11 to 0.60) with a significance level p < 0.0001. The calculated concordance correlation coefficient between two methods in the whole group was 0.26; 95%CI (0.17 to 0.35). In a subgroup of children with optimal body mass (N = 50) the concor-dance correlation coefficient was 0.18; 95%CI (0.06 to 0.29), whereas in children with overweight/obesity (N = 50) it was 0.44; 95%CI (0.29 to 057). Mean bias for the enzyme-immunosorbent method equalled 18.7%; +/- 1.96 SD (101.3% to -64%). Conclusions: With reference to 25(OH)D measurement in children, Spearman’s correlation coefficient indicated “moderate correlation” between the two compared methods, whereas the strength of agree-ment (concordance) between both methods was characterised as “poor”. The proper selection of assay for accurate assessment of vitamin D status in paediatric samples is necessary to avoid misdiagnosis.