Baris Yilmaz

Dr. Baris Yilmaz

orcid

Research Focus & Metrics

Academic Career Length

14Years (2013-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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19 July 2019 in Pediatric Blood & Cancer
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Journal Article
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DKDeniz Yılmaz Karapınar
Deniz Yılmaz Karapınar
TPTürkan Patıroğlu
Türkan Patıroğlu
AMAyşe Metin
Ayşe Metin
ÜÇÜmran Çalışkan
Ümran Çalışkan
TCTiraje Celkan
Tiraje Celkan
ŞYŞebnem Yılmaz
Şebnem Yılmaz

14 August 2013 in Annals of Nutrition and Metabolism
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Journal Article
Closed access
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AAAkif Altınbas
Akif Altınbas
BABora Aktas
Bora Aktas
BYBaris Yilmaz
Baris Yilmaz
FEFuat Ekiz
Fuat Ekiz
MDMurat Deveci
Murat Deveci
OYOsman Yuksel
Osman Yuksel
Background/Aims: An unsuccessful colonoscopy procedure is often related to inadequate bowel cleansing. It is difficult for patients to finish the whole 4 liters of polyethylene glycol-electrolyte lavage (PEG-EL) because of its salty taste and the large quantity. Pineapple juice has been shown to be an effective agent in the dissolution of undigested food in the stomach. This study assessed the effectiveness of both 2 and 4 liters of PEG-EL in precolonoscopic bowel cleansing and the quality of colonoscopic cleaning by adding 1 liter of pineapple juice to a reduced-volume PEG-based regime. Methods: The patients were chosen from those undergoing a colonoscopic procedure. A total of 126 patients were randomized into 3 groups receiving 3 different PEG-EL (Golytely®) regimes, i.e. 4 liters of PEG-EL (group 1, n = 44), 2 liters of PEG-EL (group 2, n = 39) or 2 liters of PEG-EL with 1 liter of pineapple juice (Dimes® 100%; group 3, n = 43). Results: Both the 4- and 2-liter PEG-EL regimes resulted in similar bowel cleansing scores in all parts of the colonic segments. However, adding 1 liter of pineapple juice to the reduced-volume PEG-EL regime improved the quality of the cleansing on the right side of the colon and in the transverse colon. Adequate bowel cleansing was achieved in 68.1% of the patients in group 1, 63.9% in group 2 and 80% in group 3 (the lowest score in one of the segments). On the other hand, the tolerability of the regimes was similar in all 3 groups (p = 0.509). Conclusions: Reduced PEG-EL (2 rather than 4 liters) may be sufficient for precolonoscopic bowel cleansing in the Turkish population. Administration of pineapple juice in the reduced-dose preparation regime may improve the quality of the bowel cleaning.

10 May 2023 in Leukemia & Lymphoma
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Journal Article
Closed access
BYBaris Yilmaz
Baris Yilmaz
AKAhmet Koç
Ahmet Koç
ODOmer Dogru
Omer Dogru
BTBurcu Tufan Taş
Burcu Tufan Taş
RSRabia Emel Senay
Rabia Emel Senay
The St Jude Total Therapy Study XV was the first clinical trial to prospectively use minimal residual disease levels during and after remission induction therapy to guide risk-directed treatment. We used the Total Therapy XV protocol with minimal modification in treating 115 newly diagnosed pediatric acute lymphoblastic leukemia patients from low- and middle-income groups from January 2011 to December 2017. The mean age at diagnosis was 5.97 ± 3.96 years. The median follow-up period was 88 months. Three (2.6%) patients had bone marrow relapse, and one (0.87%) had an isolated central nervous system relapse. Nineteen of the patients (16.52%) died due to infection-related complications, three (2.61%) died due to progressive disease, and one (0.87%) died due to hematopoietic stem cell transplant complications. Five-year overall survival was 80%, and event-free survival was 78.3%. Our results showed that the Total XV treatment protocol could be used successfully in patients with ALL from low- and middle-income populations. However, infection-related deaths remain a significant problem.

9 June 2026 in Journal of Human Immunity
Verified
Journal Article
Open access
MCMehmet Cihangir Catak
Mehmet Cihangir Catak
SCSalim Can
Salim Can
SHSatanay Hubrack
Satanay Hubrack
FCFeyza Bayram Catak
Feyza Bayram Catak
AEAsha Elmi
Asha Elmi
SBSafa Baris
Safa Baris
CTLA-4 is a critical immune checkpoint that maintains self-tolerance by regulating immune activation. Here, we describe the first case of homozygous CTLA-4 deficiency (CTLA4S172P/S172P), presenting with early-onset autoimmunity, lymphoproliferation, and growth failure. Immunological profiling revealed profound T- and B-cell dysregulation, characterized by T-cell hyperproliferation, a TH1-skewed helper T-cell phenotype, and expansion of activated and atypical B-cell subsets. The identified variant led to impaired CTLA-4 protein stability and enhanced lysosomal degradation, resulting in significantly reduced but still detectable total and surface expression and defective CD80 transendocytosis. Abatacept (CTLA-4-Ig) therapy effectively restored immune regulation and controlled disease activity. These findings expand the clinical and mechanistic spectrum of CTLA-4–related disorders, linking residual CTLA-4 function with the severity of immune dysregulation and emphasizing the therapeutic potential of targeted CTLA-4 modulation.

14 September 2017
Verified
Journal Article
Open access
BYBaris Yilmaz
Baris Yilmaz
GTGulnur Ayse Tokuc
Gulnur Ayse Tokuc
AKAhmet Koc
Ahmet Koc
EYEdanur Yesil
Edanur Yesil
In recent years, it is believed that Vitamin D may play a protective role in some cancer types. Certain regions of the Vitamin D receptor (VDR) gene may show a genetic difference in structure. The most frequent polymorphisms in this gene are in Taq-1, Fok-1, and Bsm-1 regions. Some adult cancer types are associated with VDR gene polymorphism such as; colorectal carcinoma, breast carcinoma, and prostate carcinoma. Reviewing the medical literature, no such study had been done on children so far. We investigated the association of the three most common gene polymorphisms (Taq-1, Fok-1, and Bsm-1 regions) in VDR gene in 32 children with brain tumors and forty control healthy volunteers. We could not find any relationship between childhood brain tumors and VDR gene polymorphism in these three regions. The present results suggest that the Taq-1, Fok-1, and Bsm-1 polymorphism in the VDR gene and pediatric brain cancers have no association.

7 July 2021 in European Journal of Therapeutics
Verified
Journal Article
Open access
TDTolga Düzenli
Tolga Düzenli
HKHüseyin Köseoğlu
Hüseyin Köseoğlu
EAElif Sumeyye Akti
Elif Sumeyye Akti
BYBaris Yilmaz
Baris Yilmaz
Post-operative bile leakage,ERCP,cholecystectomy,biliary tract injury,biliary fistula