Seokhee Kim

Seokhee Kim

orcid

Research Focus & Metrics

Academic Career Length

22Years (2005-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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16 September 2020 in Natural Product Reports
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Journal Article
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MMManuel Montalban-Lopez
Manuel Montalban-Lopez
TSThomas A. Scott
Thomas A. Scott
SRSangeetha Ramesh
Sangeetha Ramesh
IRImran R. Rahman
Imran R. Rahman
AHAuke J. van Heel
Auke J. van Heel
WDWilfred A. van der Donk
Wilfred A. van der Donk
This review provides a comprehensive update of the advances in discovery, biosynthesis, and engineering of ribosomally-synthesized and post-translationally modified peptides (RiPPs).

1 April 2005 in Cell
Verified
Journal Article
Closed access
TWTao Wu
Tao Wu
JMJuliana Malinverni
Juliana Malinverni
NRNatividad Ruiz
Natividad Ruiz
SKSeokhee Kim
Seokhee Kim
TSThomas J. Silhavy
Thomas J. Silhavy
DKDaniel Kahne
Daniel Kahne

17 August 2007 in Science
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Journal Article
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SKSeokhee Kim
Seokhee Kim
JMJuliana C. Malinverni
Juliana C. Malinverni
PSPiotr Sliz
Piotr Sliz
TSThomas J. Silhavy
Thomas J. Silhavy
SHStephen C. Harrison
Stephen C. Harrison
DKDaniel Kahne
Daniel Kahne
Integral β-barrel proteins are found in the outer membranes of mitochondria, chloroplasts, and Gram-negative bacteria. The machine that assembles these proteins contains an integral membrane protein, called YaeT in Escherichia coli , which has one or more polypeptide transport–associated (POTRA) domains. The crystal structure of a periplasmic fragment of YaeT reveals the POTRA domain fold and suggests a model for how POTRA domains can bind different peptide sequences, as required for a machine that handles numerous β-barrel protein precursors. Analysis of POTRA domain deletions shows which are essential and provides a view of the spatial organization of this assembly machine.

30 May 2006 in Molecular Microbiology
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JMJuliana C. Malinverni
Juliana C. Malinverni
JWJohn Werner
John Werner
SKSeokhee Kim
Seokhee Kim
JSJoseph G. Sklar
Joseph G. Sklar
DKDaniel Kahne
Daniel Kahne
TSThomas J. Silhavy
Thomas J. Silhavy

14 May 2010 in Science
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Journal Article
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CHChristine L. Hagan
Christine L. Hagan
SKSeokhee Kim
Seokhee Kim
DKDaniel Kahne
Daniel Kahne
Bring Out the β-Barrel: The assembly of β-barrel membrane proteins, which are found in the outer membrane of Gram-negative bacteria and in the mitochondria and chloroplasts of eukaryotes, is poorly understood. Now Hagan et al. (p. 890 , published online 8 April; see the Perspective by Stroud et al. ) describe the development of a reconstituted system that recapitulates the process of assembly of β-barrel membrane proteins by the Escherichia coli Bam complex. The assembly of a protein substrate required the purified five-protein Bam complex and several subcomplexes and a chaperone, but did not require an external input of energy.

19 May 2022 in Nature Reviews Methods Primers
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RMRosana S. Molina
Rosana S. Molina
GRGordon Rix
Gordon Rix
AMAmanuella A. Mengiste
Amanuella A. Mengiste
BÁBeatriz Álvarez
Beatriz Álvarez
DSDaeje Seo
Daeje Seo
CLChang C. Liu
Chang C. Liu
Directed evolution has revolutionized biomolecular engineering by applying cycles of mutation, amplification and selection to genes of interest (GOIs). However, classical directed evolution methods that rely on manually staged evolutionary cycles constrain the scale and depth of the evolutionary search that is possible. We describe genetic systems that achieve cycles of rapid mutation, amplification and selection fully inside living cells, enabling the continuous evolution of GOIs as cells grow. These systems advance the scale, evolutionary search depth, ease and overall power of directed evolution and access important new areas of protein evolution and engineering.