Silvia Hinojosa - Alvarez

Dr. Silvia Hinojosa - Alvarez

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Research Focus & Metrics

Academic Career Length

14Years (2013-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 August 2019 in GigaScience
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JSJose Francisco Sanchez-Herrero
Jose Francisco Sanchez-Herrero
CFCristina Frías-López
Cristina Frías-López
PEPaula Escuer
Paula Escuer
SASilvia Hinojosa - Alvarez
Silvia Hinojosa - Alvarez
MAMiquel Arnedo
Miquel Arnedo
JRJulio Rozas
Julio Rozas
We present the draft genome sequence of Dysdera silvatica, a nocturnal ground-dwelling spider from a genus that has undergone a remarkable adaptive radiation in the Canary Islands. The draft assembly was obtained using short (Illumina) and long (PaciBio and Nanopore) sequencing reads. Our de novo assembly (1.36 Gb), which represents 80% of the genome size estimated by flow cytometry (1.7 Gb), is constituted by a high fraction of interspersed repetitive elements (53.8%). The assembly completeness, using BUSCO and core eukaryotic genes, ranges from 90% to 96%. Functional annotations based on both ab initio and evidence-based information (including D. silvatica RNA sequencing) yielded a total of 48,619 protein-coding sequences, of which 36,398 (74.9%) have the molecular hallmark of known protein domains, or sequence similarity with Swiss-Prot sequences. The D. silvatica assembly is the first representative of the superfamily Dysderoidea, and just the second available genome of Synspermiata, one of the major evolutionary lineages of the “true spiders” (Araneomorphae). Dysderoids, which are known for their numerous instances of adaptation to underground environments, include some of the few examples of trophic specialization within spiders and are excellent models for the study of cryptic female choice. This resource will be therefore useful as a starting point to study fundamental evolutionary and functional questions, including the molecular bases of the adaptation to extreme environments and ecological shifts, as well of the origin and evolution of relevant spider traits, such as the venom and silk.

2 January 2014 in Mitochondrial DNA Part A
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Journal Article
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CGCarolina Galván-Tirado
Carolina Galván-Tirado
SASilvia Hinojosa - Alvarez
Silvia Hinojosa - Alvarez
PDPindaro Diaz-Jaimes
Pindaro Diaz-Jaimes
MMMarina Marcet-Hoiben
Marina Marcet-Hoiben
FLFrancisco Javier García De León
Francisco Javier García De León
The silky shark mitogenome (GeneBank accession number KF801102) has a total length of 17,774 bp, the base composition of the genomes was as follows: A (31.36%), T (30.18%), C (25.27%) and G (13.17%), which demonstrated an A + T-rich feature (61.64%), similar to other elasmobranch mitogenomes. The mitochondrial genome contained 13 protein-coding genes and 23 tRNA genes. The tRNA genes ranged from 70 to 72 bp. The gene order was the same as in other vertebrates and teleosts.

23 July 2025 in Environmental Biology of Fishes
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NBNayara Bucair
Nayara Bucair
SASilvia Hinojosa - Alvarez
Silvia Hinojosa - Alvarez
AMAndrea Marshall
Andrea Marshall
JPJessica H. Pate
Jessica H. Pate
CFCarlo Leopoldo Bezerra Francini
Carlo Leopoldo Bezerra Francini
MKMarcelo V. Kitahara
Marcelo V. Kitahara

8 February 2021 in Journal of Fish Biology
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NLNadia Sandoval Laurrabaquio‐Alvarado
Nadia Sandoval Laurrabaquio‐Alvarado
PDPíndaro Díaz‐Jaimes
Píndaro Díaz‐Jaimes
SASilvia Hinojosa - Alvarez
Silvia Hinojosa - Alvarez
MPMaria del Pilar Blanco Parra
Maria del Pilar Blanco Parra
DADouglas H. Adams
Douglas H. Adams
JCJ. Leonardo Castillo‐Géniz
J. Leonardo Castillo‐Géniz

9 October 2013 in Mitochondrial DNA
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Journal Article
Closed access
SASilvia Hinojosa - Alvarez
Silvia Hinojosa - Alvarez
PDPindaro Díaz-Jaimes
Pindaro Díaz-Jaimes
MMMarina Marcet-Hoiben
Marina Marcet-Hoiben
TGToni Gabaldon
Toni Gabaldon
The complete mitochondrial genome of the giant manta ray (Manta birostris), consists of 18,075 bp with rich A + T and low G content. Gene organization and length is similar to other species of ray. It comprises of 13 protein-coding genes, 2 rRNAs genes, 23 tRNAs genes and 1 non-coding sequence, and the control region. We identified an AT tandem repeat region, similar to that reported in Mobula japanica.

12 May 2020 in Mitochondrial DNA Part B
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Journal Article
Open access
SASilvia Hinojosa - Alvarez
Silvia Hinojosa - Alvarez
SASalvador Arias
Salvador Arias
SFSylvie Ferrand
Sylvie Ferrand
MPMichael D. Purugganan
Michael D. Purugganan
JRJulio Rozas
Julio Rozas
AWAna Wegier
Ana Wegier
The genus Mammillaria occupies diverse habitats and exhibits diverse growth patterns and a large range of morphologies. Most of the species of this genus are used as ornamental plants and are subject to mass habitat loss. Due to these factors, they are being submitted to selective pressure that might affect conservational efforts and management plans. We obtained the 133 gene chloroplast genome as part of the project of sequencing the complete genome of pincushion cactus, including 88 protein-coding genes, 8 rRNA genes, and 37 tRNA genes. The phylogenetic tree indicates the pincushion cactus is a sister species of M. supertexta and M. huitzilopochtli.