Yatrik Shah

Dr. Yatrik Shah


Research Focus & Metrics

Academic Career Length

17Years (2010-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 July 2020 in Journal of Biological Chemistry
Verified
Journal Article
Open access
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RSRashi Singhal
Rashi Singhal
YSYatrik Shah
Yatrik Shah
The gastrointestinal tract is a highly proliferative and regenerative tissue. The intestine also harbors a large and diverse microbial population collectively called the gut microbiome (microbiota). The microbiome–intestine cross-talk includes a dynamic exchange of gaseous signaling mediators generated by bacterial and intestinal metabolisms. Moreover, the microbiome initiates and maintains the hypoxic environment of the intestine that is critical for nutrient absorption, intestinal barrier function, and innate and adaptive immune responses in the mucosal cells of the intestine. The response to hypoxia is mediated by hypoxia-inducible factors (HIFs). In hypoxic conditions, the HIF activation regulates the expression of a cohort of genes that promote adaptation to hypoxia. Physiologically, HIF-dependent genes contribute to the aforementioned maintenance of epithelial barrier function, nutrient absorption, and immune regulation. However, chronic HIF activation exacerbates disease conditions, leading to intestinal injury, inflammation, and colorectal cancer. In this review, we aim to outline the major roles of physiological and pathological hypoxic conditions in the maintenance of intestinal homeostasis and in the onset and progression of disease with a major focus on understanding the complex pathophysiology of the intestine

1 January 2020 in Cell Metabolism
Verified
Journal Article
Closed access
NDNupur K. Das
Nupur K. Das
ASAndrew J. Schwartz
Andrew J. Schwartz
GBGabrielle Barthel
Gabrielle Barthel
NINaohiro Inohara
Naohiro Inohara
QLQing Liu
Qing Liu
YSYatrik Shah
Yatrik Shah

23 December 2021 in Cancer Cell
Verified
Journal Article
Closed access
HBHannah N. Bell
Hannah N. Bell
RRRyan J. Rebernick
Ryan J. Rebernick
JGJoshua Goyert
Joshua Goyert
RSRashi Singhal
Rashi Singhal
MKMiljan Kuljanin
Miljan Kuljanin
YSYatrik Shah
Yatrik Shah

11 August 2021 in Nature Communications
Verified
Journal Article
Open access
PDF file
DKDaniel M. Kremer
Daniel M. Kremer
BNBarbara S. Nelson
Barbara S. Nelson
LLLin Lin
Lin Lin
EYEmily L. Yarosz
Emily L. Yarosz
CHChristopher J. Halbrook
Christopher J. Halbrook
CLCostas Lyssiotis
Costas Lyssiotis
Cancer metabolism is rewired to support cell survival in response to intrinsic and environmental stressors. Identification of strategies to target these adaptions is an area of active research. We previously described a cytosolic aspartate aminotransaminase (GOT1)-driven pathway in pancreatic cancer used to maintain redox balance. Here, we sought to identify metabolic dependencies following GOT1 inhibition to exploit this feature of pancreatic cancer and to provide additional insight into regulation of redox metabolism. Using pharmacological methods, we identify cysteine, glutathione, and lipid antioxidant function as metabolic vulnerabilities following GOT1 withdrawal. We demonstrate that targeting any of these pathways triggers ferroptosis, an oxidative, iron-dependent form of cell death, in GOT1 knockdown cells. Mechanistically, we reveal that GOT1 inhibition represses mitochondrial metabolism and promotes a catabolic state. Consequently, we find that this enhances labile iron availability through autophagy, which potentiates the activity of ferroptotic stimuli. Overall, our study identifies a biochemical connection between GOT1, iron regulation, and ferroptosis.

1 June 2011 in Gastroenterology
Verified
Journal Article
Open access
PDF file
MTMatthew Taylor
Matthew Taylor
AQAijuan Qu
Aijuan Qu
EAErik R. Anderson
Erik R. Anderson
TMTsutomu Matsubara
Tsutomu Matsubara
AMAngelical Martin
Angelical Martin
YSYatrik Shah
Yatrik Shah
Background & Aims Iron deficiency and iron overload affect over a billion people worldwide. Dietary iron absorption in the small intestine is required for systemic iron homeostasis. Ferroportin (FPN) is the only characterized, mammalian, basolateral iron exporter. Despite the importance of FPN in maintaining iron homeostasis, its in vivo mechanisms of regulation are unclear. Methods Systemic iron homeostasis was assessed in mice with intestine-specific disruption of genes encoding the von Hippel-Lindau tumor suppressor protein (Vhl), hypoxia-inducible factor (HIF)-1α, HIF-2α, and aryl hydrocarbon nuclear translocator (ARNT). Results We observed biphasic regulation of Fpn during iron deficiency. Fpn was rapidly induced under conditions of low iron, which required the transcription factor HIF-2α. Targeted disruption of HIF-2α in the intestine inhibited Fpn induction in mice with low iron, through loss of transcriptional activation. Analysis of the Fpn promoter and in vivo chromatin immunoprecipitation assays demonstrated that HIF-2α directly binds to the Fpn promoter and induces its expression, indicating a mechanism of transcriptional regulation of Fpn following changes in systemic levels of iron. During chronic iron deficiency, FPN protein levels also increased, via increased stability through a HIF-2α-independent pathway. Conclusions In mice, expression of the gene that encodes Fpn and its protein levels are regulated by distinct pathways to provide a rapid and sustained response to acute and chronic iron deficiency. Therapies that target FPN might be developed for patients with iron-related disorders.

1 September 2016 in Cell Metabolism
Verified
Journal Article
Closed access
Xiang XueXiang Xue
Xiang Xue
SRSadeesh K. Ramakrishnan
Sadeesh K. Ramakrishnan
KWKevin Weisz
Kevin Weisz
DTDaniel Triner
Daniel Triner
LXLiwei Xie
Liwei Xie
YSYatrik Shah
Yatrik Shah