Sergey Shabelnikov

Dr. Sergey Shabelnikov

orcid

Research Focus & Metrics

Academic Career Length

18Years (2009-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 August 2024 in Cancer Research Communications
Verified
Journal Article
Open access
Maxim ShevtsovMaxim Shevtsov
Maxim Shevtsov
Danila BobkovDanila Bobkov
Danila Bobkov
NYNatalia Mikhailovna Yudintceva
Natalia Mikhailovna Yudintceva
RTRuslana Tagaeva
Ruslana Tagaeva
AKAleksandr Kim
Aleksandr Kim
SCStephanie Combs
Stephanie Combs
Molecular chaperones, especially 70 kDa heat shock protein, in addition to their intracellular localization in cancer cells, can be exposed on the surface of the plasma membrane. We report that the membrane-associated chaperone mHsp70 of malignant brain tumors is required for high migratory and invasive activity of cancer cells. Live-cell inverted confocal microscopy of tumor samples from adult (n = 23) and pediatric (n = 9) neurooncologic patients showed pronounced protein expression on the membrane, especially in the perifocal zone. Mass spectrometry analysis of lipid rafts isolated from tumor cells confirmed the presence of the protein in the chaperone cluster (including representatives of other families, such as Hsp70, Hsc70, Hsp105, and Hsp90), which in turn, during interactome analysis, was associated with proteins involved in cell migration (e.g., Rac1, RhoC, and myosin-9). The use of small-molecule inhibitors of HSP70 (PES and JG98) led to a substantial decrease in the invasive potential of cells isolated from a tumor sample of patients, which indicates the role of the chaperone in invasion. Moreover, the use of HSP70 inhibitors in animal models of orthotopic brain tumors significantly delayed tumor progression, which was accompanied by an increase in overall survival. Data demonstrate that chaperone inhibitors, particularly JG98, disrupt the function of mHsp70, thereby providing an opportunity to better understand the diverse functions of this protein and offer aid in the development of novel cancer therapies. Significance: Membrane-bound mHsp70 is required for brain tumor cell migration and invasion and therefore could be employed as a target for anticancer therapies.

1 January 2019 in Journal of Experimental Biology
Verified
Journal Article
Closed access
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SSSergey Shabelnikov
Sergey Shabelnikov
Danila BobkovDanila Bobkov
Danila Bobkov
NSNatalia S. Sharlaimova
Natalia S. Sharlaimova
OPOlga A. Petukhova
Olga A. Petukhova
Echinoderms, possessing outstanding regenerative capabilities, provide a unique model system for the study of response to injury. However, there is little known about the proteomic composition of coelomic fluid, an important biofluid circulating throughout the animal9s body and reflecting the overall biological status of the organism. In this study, we used LC-MALDI tandem mass spectrometry to characterize the proteome of the cell-free coelomic fluid of starfish Asterias rubens and to follow the changes occurring in response to puncture wound and blood loss. In total, 91 proteins were identified, of which 61 were extracellular soluble and 16 were bound to the plasma membrane. Most represented functional terms were “pattern recognition receptor activity” and “peptidase inhibitor activity”. A series of candidate proteins involved in early response to injury was revealed. Ependymin, β-microseminoprotein, serum amyloid A, and avidin-like proteins, which are known to be involved in intestinal regeneration in sea cucumber, were also identified as injury-responsive proteins. Our results expand the list of proteins potentially involved in defense and regeneration in echinoderms and demonstrate dramatic effects of injury on the CF proteome.

25 November 2020 in Cell and tissue research
Verified
Journal Article
Closed access
PDF file
NSNatalia Sharlaimova
Natalia Sharlaimova
SSSergey Shabelnikov
Sergey Shabelnikov
DBDan Bobkov
Dan Bobkov
MMMarina Martynova
Marina Martynova
OBOlga Bystrova
Olga Bystrova
OPOlga Petukhova
Olga Petukhova

5 May 2020 in Molecular Biology Reports
Verified
Journal Article
Closed access
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Danila BobkovDanila Bobkov
Danila Bobkov
APAnastasia Polyanskaya
Anastasia Polyanskaya
AMAnastasia Musorina
Anastasia Musorina
ELEkaterina Lomert
Ekaterina Lomert
SSSergey Shabelnikov
Sergey Shabelnikov
GPGalina Poljanskaya
Galina Poljanskaya

18 July 2018 in Cell Cycle
Verified
Journal Article
Closed access
Alexey G. MittenbergAlexey G. Mittenberg
Alexey G. Mittenberg
VKValeria O. Kuzyk
Valeria O. Kuzyk
SSSergey Shabelnikov
Sergey Shabelnikov
DGDaria P. Gorbach
Daria P. Gorbach
ASAlla Shatrova
Alla Shatrova
Nick BarlevNick Barlev
Nick Barlev
The proteasome is the key player in targeted degradation of cellular proteins and serves as a therapeutic target for treating several blood malignancies. Although in general, degradation of proteins via the proteasome requires their ubiquitination, a subset of proteins can be degraded independently of their ubiquitination by direct interaction with subunits of the 20S proteasome core. Thus, investigation of the proteasome-associated proteins may help identify novel targets of proteasome degradation and provide important insights into the mechanisms of malignant cell proteostasis. Here, using biochemical purification of proteasomes from multiple myeloma (MM) cells followed by mass-spectrometry we have uncovered 77 proteins in total that specifically interacted with the 20S proteasome via its PSMA3 subunit. Our GST pull-down assays followed by western blots validated the interactions identified by mass-spectrometry. Eleven proteins were confirmed to bind PSMA3 only upon apoptotic conditions induced by a combined treatment with the proteasome inhibitor, bortezomib, and genotoxic drug, doxorubicin. Nine of these eleven proteins contained bioinformatically predicted intrinsically disordered regions thus making them susceptible to ubiquitin-independent degradation. Importantly, among those proteins five interacted with the ubiquitin binding affinity matrix suggesting that these proteins may also be ubiquitinylated and hence degraded via the ubiquitin-dependent pathway. Collectively, these PSMA3-interacting proteins represent novel potential substrates for 20S proteasomes upon apoptosis. Furthermore, these data may shed light on the molecular mechanisms of cellular response to chemotherapy. Abbreviations: BD: bortezomib/doxorubicin treatment; CDK: cyclin-dependent kinases; CHCA: α-cyanohydroxycinnamic acid; IDP: intrinsically disordered proteins; IDR: intrinsically disordered regions; IPG: immobilized pI gradient; MALDI TOF/TOF: matrix-assisted laser desorption/ionization time-of-flight tandem mass-spectrometry; MM: multiple myeloma; ODC: ornithine decarboxylase; PI: proteasomal inhibitors; PSMA: alpha-type 20S proteasome subunits; PTMs: post-translational modifications; SDS-PAGE: sodium dodecylsulphate polyacrylamide gel electrophoresis; UIP: ubiquitin-independent proteasomal proteolysis.

24 May 2021 in Molecules
Verified
Journal Article
Open access
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SPSergey Parfenyev
Sergey Parfenyev
SSSergey Shabelnikov
Sergey Shabelnikov
DPDanila Y. Pozdnyakov
Danila Y. Pozdnyakov
Olga GnedinaOlga Gnedina
Olga Gnedina
LALeonid S. Adonin
Leonid S. Adonin
Alexey G. MittenbergAlexey G. Mittenberg
Alexey G. Mittenberg
Breast cancer is the most frequently diagnosed malignant neoplasm and the second leading cause of cancer death among women. Epithelial-to-mesenchymal Transition (EMT) plays a critical role in the organism development, providing cell migration and tissue formation. However, its erroneous activation in malignancies can serve as the basis for the dissemination of cancer cells and metastasis. The Zeb1 transcription factor, which regulates the EMT activation, has been shown to play an essential role in malignant transformation. This factor is involved in many signaling pathways that influence a wide range of cellular functions via interacting with many proteins that affect its transcriptional functions. Importantly, the interactome of Zeb1 depends on the cellular context. Here, using the inducible expression of Zeb1 in epithelial breast cancer cells, we identified a substantial list of novel potential Zeb1 interaction partners, including proteins involved in the formation of malignant neoplasms, such as ATP-dependent RNA helicase DDX17and a component of the NURD repressor complex, CTBP2. We confirmed the presence of the selected interactors by immunoblotting with specific antibodies. Further, we demonstrated that co-expression of Zeb1 and CTBP2 in breast cancer patients correlated with the poor survival prognosis, thus signifying the functionality of the Zeb1–CTBP2 interaction.