Samer Singh

Dr. Samer Singh


Research Focus & Metrics

Academic Career Length

26Years (2001-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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28 April 2022 in Frontiers in Environmental Science
Verified
Journal Article
Open access
ASAshish Kumar Singh
Ashish Kumar Singh
RKRajinder Kaur
Rajinder Kaur
SVShashikala Verma
Shashikala Verma
SSSamer Singh
Samer Singh
The manuscript endeavors to provide a perspective on the role of water bodies in the spread of antimicrobial (antibiotic) resistance (AMR), antimicrobial resistant bacteria (ARB), and antimicrobial resistance genes (ARGs) among pathogens, animals, and humans. We briefly indicate how the AMR problem is globally affecting public health, along with strategies and mechanisms to combat the dissemination of ARB and ARGs. A brief systematic survey of the literature (2015-onwards) for the presence of antimicrobial residues and the occurrence of ARGs and antimicrobial resistant microorganisms in different water bodies/sources indicates the gravity of the situation and suggests their important role in the occurrence and spread of AMR, ARB, and ARGs. The prevalent water treatment methods which tend to reduce ARB and ARGs from water resources are unable to remove them completely, allowing the problem of AMR to continue and spread to organisms of concern. In this opinion article, we attempt to underline the key role of controlling the release/discharge of antimicrobial contaminants in water bodies and their buildup in checking the development and spread of AMR. The reduction in the release of antibiotic residues in the environment, especially water bodies, combined with the development of improved surveillance means and efficacious treatment/removal/decomposition methods could help curb the menace of AMR effectively. We suggest the expansion of the ambit of ‘One Health Approach to AMR crises proposed by the World Bank, 2021 to include the ‘reduction of antimicrobial contamination of the environment’ as the ‘seventh domain’ of activity to effectively achieve its objective.

14 August 2006 in Oncogene
Verified
Journal Article
Open access
PDF file
ZYZ Yuan
Z Yuan
JGJ A Goetz
J A Goetz
SSSamer Singh
Samer Singh
SOS K Ogden
S K Ogden
WPW J Petty
W J Petty
DRD J Robbins
D J Robbins
Although it had previously been suggested that the hedgehog (HH) pathway might be activated in some lung tumors, the dependence of non-small cell lung carcinomas (NSCLC) for HH activity had not been comprehensively studied. During a screen of a panel of 60 human tumor cell lines with an HH antagonist, we observed that the proliferation of a subset of NSCLC cell lines was inhibited. These NSCLC cell lines express HH, as well as key HH target genes, consistent with them being activated through an autocrine mechanism. Interestingly, we also identified a number of NSCLC cell lines that express high levels of the downstream transcription factor GLI1 and harbor enhanced levels of HH activity, but appear insensitive to known HH antagonists. We hypothesized that the high levels of GLI1 in these cells would function downstream of the HH antagonist target, allowing them to bypass the antagonist-mediated block in proliferation. Consistent with this hypothesis, when the levels of GLI1 are knocked down in such cells, they become sensitive to these inhibitors. We go on to show that a large percentage of primary NSCLC samples express GLI1, consistent with constitutive activation of the HH pathway in these samples. Taken together, these results establish the involvement of the HH signaling pathway in a subset of NSCLCs.

1 February 2006 in Journal of Biological Chemistry
Verified
Journal Article
Open access
PDF file
JGJohn A. Goetz
John A. Goetz
SSSamer Singh
Samer Singh
LSLiza M. Suber
Liza M. Suber
FKF. Jon Kull
F. Jon Kull
DRDavid J. Robbins
David J. Robbins
Although members of the Hedgehog (Hh) family were initially described as morphogens, many of these early conclusions were based on experiments that used non-physiologically relevant forms of Hh. Native Hh is modified by cholesterol (HhNp) and palmitate. These hydrophobic modifications are responsible for the ability of Hh to associate with cellular membranes, a property that initially appeared inconsistent with its ability to act far from its site of synthesis. Although it is now clear that Hh family members are capable of acting directly in long-range signaling, the form of Hh capable of this activity remains controversial. We have previously provided evidence for a freely diffusible multimeric form of Sonic Hedgehog (Shh) termed s-ShhNp, which is capable of accumulating in a gradient fashion through a morphogenic field. Here, we provide further evidence that s-ShhNp is the physiologically relevant form of Shh. We show that the biological activity of freely diffusible ShhNp resides in its multimeric form and that this multimeric form is exceedingly stable, even to high concentrations of salt and detergent. Furthermore, we now validate the Shh-Shh interactions previously observed in the crystal structure of human Shh, showing that a highly conserved amino-terminal domain of Shh is important for the formation of s-ShhNp. We also conclusively show that palmitoylation is required for s-ShhNp formation. Thus, our results identify both protein-protein and protein-lipid interactions that are required for s-ShhNp formation, and provide the first structural analyses supporting the existence of Shh multimers.

14 July 2014 in Oncogene
Verified
Journal Article
Open access
PDF file
APA Patel
A Patel
DBD G A Burton
D G A Burton
KHK Halvorsen
K Halvorsen
WBW Balkan
W Balkan
TRT Reiner
T Reiner
PRPriyamvada Rai
Priyamvada Rai
Oncogenic RAS promotes production of reactive oxygen species (ROS), which mediate pro-malignant signaling but can also trigger DNA damage-induced tumor suppression. Thus RAS-driven tumor cells require redox-protective mechanisms to mitigate the damaging aspects of ROS. Here, we show that MutT Homolog 1 (MTH1), the mammalian 8-oxodGTPase that sanitizes oxidative damage in the nucleotide pool, is important for maintaining several KRAS-driven pro-malignant traits in a nonsmall cell lung carcinoma (NSCLC) model. MTH1 suppression in KRAS-mutant NSCLC cells impairs proliferation and xenograft tumor formation. Furthermore, MTH1 levels modulate KRAS-induced transformation of immortalized lung epithelial cells. MTH1 expression is upregulated by oncogenic KRAS and correlates positively with high KRAS levels in NSCLC human tumors. At a molecular level, in p53-competent KRAS-mutant cells, MTH1 loss provokes DNA damage and induction of oncogene-induced senescence. In p53-nonfunctional KRAS-mutant cells, MTH1 suppression does not produce DNA damage but reduces proliferation and leads to an adaptive decrease in KRAS expression levels. Thus, MTH1 not only enables evasion of oxidative DNA damage and its consequences, but can also function as a molecular rheostat for maintaining oncogene expression at optimal levels. Accordingly, our results indicate MTH1 is a novel and critical component of oncogenic KRAS-associated malignancy and its inhibition is likely to yield significant tumor-suppressive outcomes in KRAS-driven tumors.

29 April 2013 in PLOS ONE
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Journal Article
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MMManish Manish
Manish Manish
ARAmit Rahi
Amit Rahi
MKManpreet Kaur
Manpreet Kaur
RBRakesh Bhatnagar
Rakesh Bhatnagar
SSSamer Singh
Samer Singh
Bacillus anthracis, the etiological agent of anthrax, is a major bioterror agent. Vaccination is the most effective prophylactic measure available against anthrax. Currently available anthrax vaccines have issues of the multiple booster dose requirement, adjuvant-associated side effects and stability. Use of biocompatible and biodegradable nanoparticles to deliver the antigens to immune cells could solve the issues associated with anthrax vaccines. We hypothesized that the delivery of a stable immunogenic domain 4 of protective antigen (PAD4) of Bacillus anthracis encapsulated in a poly (lactide-co-glycolide) (PLGA) - an FDA approved biocompatible and biodegradable material, may alleviate the problems of booster dose, adjuvant toxicity and stability associated with anthrax vaccines. We made a PLGA based protective antigen domain 4 nanoparticle (PAD4-NP) formulation using water/oil/water solvent evaporation method. Nanoparticles were characterized for antigen content, morphology, size, polydispersity and zeta potential. The immune correlates and protective efficacy of the nanoparticle formulation was evaluated in Swiss Webster outbred mice. Mice were immunized with single dose of PAD4-NP or recombinant PAD4. The PAD4-NP elicited a robust IgG response with mixed IgG1 and IgG2a subtypes, whereas the control PAD4 immunized mice elicited low IgG response with predominant IgG1 subtype. The PAD4-NP generated mixed Th1/Th2 response, whereas PAD4 elicited predominantly Th2 response. When we compared the efficacy of this single-dose vaccine nanoformulation PAD4-NP with that of the recombinant PAD4 in providing protective immunity against a lethal challenge with Bacillus anthracis spores, the median survival of PAD4-NP immunized mice was 6 days as compared to 1 day for PAD4 immunized mice (p<0.001). Thus, we demonstrate, for the first time, the possibility of the development of a single-dose and adjuvant-free protective antigen based anthrax vaccine in the form of PAD4-NP. Further work in this direction may produce a better and safer candidate anthrax vaccine.

21 February 2008 in Stem Cells
Verified
Journal Article
Open access
PDF file
NLNa Li
Na Li
SSSamer Singh
Samer Singh
PCPratima Cherukuri
Pratima Cherukuri
HLHua Li
Hua Li
ZYZiqiang Yuan
Ziqiang Yuan
JDJames DiRenzo
James DiRenzo
TP63 is required for preservation of epithelial regenerative stasis and regulates the activity of diverse genetic pathways; however, specific effector pathways are poorly understood. Data presented here indicate that reciprocal regulatory interactions between hedgehog signaling and TP63 mediate stage-specific effects on proliferation and clonigenicity of separable enriched mammary stem and progenitor fractions. Analysis of ΔN-p63 and TA-p63 indicates segregated expression in mammary stem and progenitor fractions, respectively, demonstrating that differential TP63 promoter selection occurs during elaboration of mammary progenitors by mammary stem cells. This segregation underlies mammary progenitor-specific expression of Indian Hedgehog, identifying it as a binary transcriptional target of TP63. Hedgehog activation in vivo enhances elaboration of mammary progenitors and decreases label retention within mammary stem cell-enriched fractions, suggesting that hedgehog exerts a mitogenic effect on mammary stem cells. Hedgehog signaling promotes differential TP63 promoter usage via disruption of Gli3 or Gli3R accumulation, and shRNA-mediated disruption of Gli3 expression was sufficient to alter TP63 promoter usage and enhance clonigenicity of mammary stem cells. Finally, hedgehog signaling is enhanced during pregnancy, where it contributes to expansion of the mammary progenitor compartment. These studies support a model in which hedgehog activates elaboration and differentiation of mammary progenitors via differential TP63 promoter selection and forfeiture of self-renewing capacity. Disclosure of potential conflicts of interest is found at the end of this article.