Joshua Coomey

Dr. Joshua Coomey


Research Focus & Metrics

Academic Career Length

7Years (2020-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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30 July 2021 in Science
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Journal Article
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IRIvan Radin
Ivan Radin
RRRyan A. Richardson
Ryan A. Richardson
JCJoshua Coomey
Joshua Coomey
EWEthan R. Weiner
Ethan R. Weiner
CBCarlisle S. Bascom
Carlisle S. Bascom
EHElizabeth S. Haswell
Elizabeth S. Haswell
Plant cell growth regulation: Piezo sensors in animal cells are localized in the cell membrane and transduce mechanical signals. The cell membrane of plant cells, unlike that of animal cells, is usually plastered up against a stiff cell wall and does not have much mobility. Much of the cell’s volume is accounted for by a large central vacuole, the membrane of which, the tonoplast, is not so mechanically constrained. Radin et al . studied how and where plant cells use Piezo sensors. Plant homologs of the animal mechanosensitive channels are found not in the plasma membrane but rather in the tonoplast. In both moss and the small flowering plant Arabidopsis , mutations in plant Piezo sensors altered vacuolar morphology and growth patterns in tip-growing cells. —PJH

13 April 2020 in New Phytologist
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Journal Article
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JCJoshua Coomey
Joshua Coomey
Richard SiboutRichard Sibout
Richard Sibout
SHSamuel P. Hazen
Samuel P. Hazen
Summary: A key aspect of plant growth is the synthesis and deposition of cell walls. In specific tissues and cell types including xylem and fibre, a thick secondary wall comprised of cellulose, hemicellulose and lignin is deposited. Secondary cell walls provide a physical barrier that protects plants from pathogens, promotes tolerance to abiotic stresses and fortifies cells to withstand the forces associated with water transport and the physical weight of plant structures. Grasses have numerous cell wall features that are distinct from eudicots and other plants. Study of the model species Brachypodium distachyon as well as other grasses has revealed numerous features of the grass cell wall. These include the characterisation of xylosyl and arabinosyltransferases, a mixed‐linkage glucan synthase and hydroxycinnamate acyltransferases. Perhaps the most fertile area for discovery has been the formation of lignins, including the identification of novel substrates and enzyme activities towards the synthesis of monolignols. Other enzymes function as polymerising agents or transferases that modify lignins and facilitate interactions with polysaccharides. The regulatory aspects of cell wall biosynthesis are largely overlapping with those of eudicots, but salient differences among species have been resolved that begin to identify the determinants that define grass cell walls.

28 February 2020 in New Phytologist
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KMKirk J‐M. MacKinnon
Kirk J‐M. MacKinnon
BCBenjamin Cole
Benjamin Cole
CYChang Yu
Chang Yu
JCJoshua Coomey
Joshua Coomey
NHNolan T. Hartwick
Nolan T. Hartwick
SHSamuel P. Hazen
Samuel P. Hazen

29 November 2021 in Journal of Experimental Botany
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Journal Article
Closed access
YWYanbing Wang
Yanbing Wang
JCJoshua Coomey
Joshua Coomey
KMKari Miller
Kari Miller
GJGregory S Jensen
Gregory S Jensen
EHElizabeth S Haswell
Elizabeth S Haswell
Cells employ multiple systems to maintain cellular integrity, including mechanosensitive ion channels and the cell wall integrity (CWI) pathway. Here, we use pollen as a model system to ask how these different mechanisms are interconnected at the cellular level. MscS-Like 8 (MSL8) is a mechanosensitive channel required to protect Arabidopsis thaliana pollen from osmotic challenges during in vitro rehydration, germination, and tube growth. New CRISPR/Cas9 and artificial miRNA-generated msl8 alleles produced unexpected pollen phenotypes, including the ability to germinate a tube after bursting, dramatic defects in cell wall structure, and disorganized callose deposition at the germination site. We document complex genetic interactions between MSL8 and two previously established components of the CWI pathway, MARIS and ANXUR1/2. Overexpression of MARISR240C-FP suppressed the bursting, germination, and callose deposition phenotypes of msl8 mutant pollen. Null msl8 alleles suppressed the internalized callose structures observed in MARISR240C-FP lines. Similarly, MSL8-YFP overexpression suppressed bursting in the anxur1/2 mutant background, while anxur1/2 alleles reduced the strong rings of callose around ungerminated pollen grains in MSL8-YFP overexpressors. These data show that mechanosensitive ion channels modulate callose deposition in pollen and provide evidence that cell wall and membrane surveillance systems coordinate in a complex manner to maintain cell integrity.

3 May 2024 in Quantitative Plant Biology
Verified
Journal Article
Open access
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JCJoshua Coomey
Joshua Coomey
KMKirk J.-M. MacKinnon
Kirk J.-M. MacKinnon
IMIan W. McCahill
Ian W. McCahill
BKBahman Khahani
Bahman Khahani
PHPubudu P. Handakumbura
Pubudu P. Handakumbura
SHSamuel P. Hazen
Samuel P. Hazen
Plant growth requires the integration of internal and external cues, perceived and transduced into a developmental programme of cell division, elongation and wall thickening. Mechanical forces contribute to this regulation, and thigmomorphogenesis typically includes reducing stem height, increasing stem diameter, and a canonical transcriptomic response. We present data on a bZIP transcription factor involved in this process in grasses. Brachypodium distachyon SECONDARY WALL INTERACTING bZIP (SWIZ) protein translocated into the nucleus following mechanostimulation. Classical touch-responsive genes were upregulated in B. distachyon roots following touch, including significant induction of the glycoside hydrolase 17 family, which may be unique to grass thigmomorphogenesis. SWIZ protein binding to an E-box variant in exons and introns was associated with immediate activation followed by repression of gene expression. SWIZ overexpression resulted in plants with reduced stem and root elongation. These data further define plant touch-responsive transcriptomics and physiology, offering insights into grass mechanotranduction dynamics.