A novel actinobacterium, designated strain CFH 90414T, was isolated from sediment sampled at a saline lake in Yuncheng, Shanxi, PR China. The taxonomic position of the strain was investigated by using a polyphasic approach. Cells of strain CFH 90414T were Gram-reaction-positive, aerobic and non-motile. Growth occured at 4−40 °C, pH 5.0−9.0 and in the presence of up to 0–3.0 % (w/v) NaCl. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain CFH 90414T was a member of the genus Agromyces . The 16S rRNA gene sequence similarity analysis indicated that strain CFH 90414T was most closely related to Agromyces italicus JCM 14320T (98.07 %) and Agromyces lapidis JCM 14321T (97.18 %). The whole genome of CFH 90414T was 3.64 Mb, and showed a G+C content of 71.5 mol%. The average nucleotide identity (ANI) values and digital DNA–DNA hybridization (dDDH) values between CFH 90414T and the other species of the genus Agromyces were found to be low (ANI <78.99 % and dDDH <22.9 %). The whole-cell sugars were rhamnose, mannose, ribose, glucose and galactose. The isolate contained l-2,4-diaminobutyric acid, d-alanine, d-glutamic acid and glycine in the cell-wall peptidoglycan. The predominant menaquinone was MK-12. The major cellular fatty acids were anteiso-C15 : 0, anteiso-C17 : 0 and iso-C16 : 0. The polar lipid profile contained diphosphatidylglycerol, phosphatidylglycerol and an unidentified glycolipid. On the basis of phenotypic, genotypic and phylogenetic data, strain CFH 90414T is considered to represent a novel species of the genus Agromyces , for which the name Agromyces agglutinans sp. nov. is proposed. The type strain is CFH 90414T (=DSM 105966T=KCTC 49062T).
Microorganisms, as the foundation of deep-sea ecosystems, are crucial for maintaining the structure and stability of polymetallic nodule field environments. To investigate the community structure and distributional patterns of benthic microorganisms in such environments, this study used high-throughput sequencing to analyze the composition, diversity, and environmental correlations of bacteria, archaea, and fungi in the BPC (Beijing Pioneer Hi-tech Development Corporation Ltd., Beijing, China). Furthermore, microbial communities from BPC were compared with those from UK-1 (UK Seabed Resources, Southampton, UK) in terms of community structure and co-occurrence network characteristics. The results revealed that in the BPC, the bacterial communities were dominated by Proteobacteria and Chloroflexi, while Crenarchaeota represented the overwhelmingly dominant group. Fungal communities were primarily composed of Ascomycota and Basidiomycota. Correlation Analysis suggested that water depth, TOC (Total organic carbon), TN (Total nitrogen), and δ15N emerged as the key environmental drivers of microbial community variation. Comparative analysis showed microbial groups exhibited certain similarities but also some differences at the phylum, class, and order levels, with the differences becoming increasingly pronounced at finer taxonomic resolutions between BPC and UK-1. Co-occurrence network analyses indicated the microbial networks with higher density and node connectivity in the BPC, whereas the UK-1 exhibited greater modularity and clustering coefficients. Microbial interactions were weaker in the UK-1, but its resilience to benthic disturbance was expected to be higher than in the BPC.