Rostislav Skrabana

Dr. Rostislav Skrabana

orcid

Research Focus & Metrics

Academic Career Length

21Years (2006-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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16 March 2019 in Biomolecules
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Journal Article
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KMKateřina Melková
Kateřina Melková
VZVojtěch Zapletal
Vojtěch Zapletal
SNSubhash Narasimhan
Subhash Narasimhan
SJSeverine Jansen
Severine Jansen
JHJozef Hritz
Jozef Hritz
LŽLukáš Žídek
Lukáš Žídek
The stability and dynamics of cytoskeleton in brain nerve cells are regulated by microtubule associated proteins (MAPs), tau and MAP2. Both proteins are intrinsically disordered and involved in multiple molecular interactions important for normal physiology and pathology of chronic neurodegenerative diseases. Nuclear magnetic resonance and cryo-electron microscopy recently revealed propensities of MAPs to form transient local structures and long-range contacts in the free state, and conformations adopted in complexes with microtubules and filamentous actin, as well as in pathological aggregates. In this paper, we compare the longest, 441-residue brain isoform of tau (tau40), and a 467-residue isoform of MAP2, known as MAP2c. For both molecules, we present transient structural motifs revealed by conformational analysis of experimental data obtained for free soluble forms of the proteins. We show that many of the short sequence motifs that exhibit transient structural features are linked to functional properties, manifested by specific interactions. The transient structural motifs can be therefore classified as molecular recognition elements of tau40 and MAP2c. Their interactions are further regulated by post-translational modifications, in particular phosphorylation. The structure-function analysis also explains differences between biological activities of tau40 and MAP2c.

24 March 2023 in Pharmaceutics
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AOAnna Ohradanova-Repic
Anna Ohradanova-Repic
RPRomana Praženicová
Romana Praženicová
LGLaura Gebetsberger
Laura Gebetsberger
TMTetiana Moskalets
Tetiana Moskalets
RSRostislav Skrabana
Rostislav Skrabana
VLVladimir Leksa
Vladimir Leksa
Lactoferrin is an iron-binding glycoprotein present in most human exocrine fluids, particularly breast milk. Lactoferrin is also released from neutrophil granules, and its concentration increases rapidly at the site of inflammation. Immune cells of both the innate and the adaptive immune system express receptors for lactoferrin to modulate their functions in response to it. On the basis of these interactions, lactoferrin plays many roles in host defense, ranging from augmenting or calming inflammatory pathways to direct killing of pathogens. Complex biological activities of lactoferrin are determined by its ability to sequester iron and by its highly basic N-terminus, via which lactoferrin binds to a plethora of negatively charged surfaces of microorganisms and viruses, as well as to mammalian cells, both normal and cancerous. Proteolytic cleavage of lactoferrin in the digestive tract generates smaller peptides, such as N-terminally derived lactoferricin. Lactoferricin shares some of the properties of lactoferrin, but also exhibits unique characteristics and functions. In this review, we discuss the structure, functions, and potential therapeutic uses of lactoferrin, lactoferricin, and other lactoferrin-derived bioactive peptides in treating various infections and inflammatory conditions. Furthermore, we summarize clinical trials examining the effect of lactoferrin supplementation in disease treatment, with a special focus on its potential use in treating COVID-19.

26 May 2009 in BMC Genomic Data
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MBMangesh R Bhide
Mangesh R Bhide
RMRastislav Mucha
Rastislav Mucha
IMIvan Mikula
Ivan Mikula
LKLucia Kisova
Lucia Kisova
RSRostislav Skrabana
Rostislav Skrabana
MNMichal Novak
Michal Novak
Toll like receptors (TLR) play the central role in the recognition of pathogen associated molecular patterns (PAMPs). Mutations in the TLR1, TLR2 and TLR4 genes may change the ability to recognize PAMPs and cause altered responsiveness to the bacterial pathogens.

22 January 2022 in EBioMedicine
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Journal Article
Open access
BKBranislav Kovacech
Branislav Kovacech
LFLubica Fialova
Lubica Fialova
PFPeter Filipcik
Peter Filipcik
RSRostislav Skrabana
Rostislav Skrabana
MZMonika Zilkova
Monika Zilkova
EKEva Kontsekova
Eva Kontsekova
The emergence of new SARS-CoV-2 variants of concern B.1.1.7 (Alpha), B.1.351 (Beta), P.1 (Gamma) and B.1.617.2 (Delta) that harbor mutations in the viral S protein raised concern about activity of current vaccines and therapeutic antibodies. Independent studies have shown that mutant variants are partially or completely resistant against some of the therapeutic antibodies authorized for emergency use. We employed hybridoma technology, ELISA-based and cell-based S-ACE2 interaction assays combined with authentic virus neutralization assays to develop second-generation antibodies, which were specifically selected for their ability to neutralize the new variants of SARS-CoV-2. AX290 and AX677, two monoclonal antibodies with non-overlapping epitopes, exhibit subnanomolar or nanomolar affinities to the receptor binding domain of the viral Spike protein carrying amino acid substitutions N501Y, N439K, E484K, K417N, and a combination N501Y/E484K/K417N found in the circulating virus variants. The antibodies showed excellent neutralization of an authentic SARS-CoV-2 virus representing strains circulating in Europe in spring 2020 and also the variants of concern B.1.1.7 (Alpha), B.1.351 (Beta) and B.1.617.2 (Delta). In addition, AX677 is able to bind Omicron Spike protein just like the wild type Spike. The combination of the two antibodies prevented the appearance of escape mutations of the authentic SARS-CoV-2 virus. Prophylactic administration of AX290 and AX677, either individually or in combination, effectively reduced viral burden and inflammation in the lungs, and prevented disease in a mouse model of SARS-CoV-2 infection. The virus-neutralizing properties were fully reproduced in chimeric mouse-human versions of the antibodies, which may represent a promising tool for COVID-19 therapy. The study was funded by AXON Neuroscience SE and AXON COVIDAX a.s.

1 December 2006 in Analytical Biochemistry
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Journal Article
Closed access
RSRostislav Skrabana
Rostislav Skrabana
MSMichaela Skrabanova-Khuebachova
Michaela Skrabanova-Khuebachova
PKPeter Kontsek
Peter Kontsek
MNMichal Novak
Michal Novak

25 September 2012 in Acta Crystallographica Section F Structural Biology and Crystallization Communications
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OCOndrej Cehlár
Ondrej Cehlár
RSRostislav Skrabana
Rostislav Skrabana
AKAndrej Kovac
Andrej Kovac
BKBranislav Kovacech
Branislav Kovacech
MNMichal Novak
Michal Novak
The Alzheimer's disease-associated protein tau is an intrinsically disordered protein with no preferred structure in solution. Under physiological conditions, tau binds to microtubules and regulates their dynamics, whereas during the development of neurodegeneration tau dissociates from microtubules, misfolds and creates highly insoluble deposits. To elucidate the determinants of tau-protein misfolding, tau peptides from microtubule-binding motifs were crystallized in complexes with Fab fragments of specific monoclonal antibodies. The crystals diffracted to 1.69 Å resolution and gave complete data sets using a synchrotron X-ray source. Molecular replacement was used to solve the phase problem.