Mutlu Mete

Dr. Mutlu Mete

orcid

Research Focus & Metrics

Academic Career Length

15Years (2012-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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6 October 2016 in BMC Bioinformatics
Verified
Journal Article
Open access
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MMMutlu Mete
Mutlu Mete
Unal SakogluUnal Sakoglu
Unal Sakoglu
JSJeffrey S. Spence
Jeffrey S. Spence
MDMichael D. DevousSr.
Michael D. DevousSr.
THThomas S. Harris
Thomas S. Harris
BABryon Adinoff
Bryon Adinoff
Neuroimaging studies have yielded significant advances in the understanding of neural processes relevant to the development and persistence of addiction. However, these advances have not explored extensively for diagnostic accuracy in human subjects. The aim of this study was to develop a statistical approach, using a machine learning framework, to correctly classify brain images of cocaine-dependent participants and healthy controls. In this study, a framework suitable for educing potential brain regions that differed between the two groups was developed and implemented. Single Photon Emission Computerized Tomography (SPECT) images obtained during rest or a saline infusion in three cohorts of 2–4 week abstinent cocaine-dependent participants (n = 93) and healthy controls (n = 69) were used to develop a classification model. An information theoretic-based feature selection algorithm was first conducted to reduce the number of voxels. A density-based clustering algorithm was then used to form spatially connected voxel clouds in three-dimensional space. A statistical classifier, Support Vectors Machine (SVM), was then used for participant classification. Statistically insignificant voxels of spatially connected brain regions were removed iteratively and classification accuracy was reported through the iterations. The voxel-based analysis identified 1,500 spatially connected voxels in 30 distinct clusters after a grid search in SVM parameters. Participants were successfully classified with 0.88 and 0.89 F-measure accuracies in 10-fold cross validation (10xCV) and leave-one-out (LOO) approaches, respectively. Sensitivity and specificity were 0.90 and 0.89 for LOO; 0.83 and 0.83 for 10xCV. Many of the 30 selected clusters are highly relevant to the addictive process, including regions relevant to cognitive control, default mode network related self-referential thought, behavioral inhibition, and contextual memories. Relative hyperactivity and hypoactivity of regional cerebral blood flow in brain regions in cocaine-dependent participants are presented with corresponding level of significance. The SVM-based approach successfully classified cocaine-dependent and healthy control participants using voxels selected with information theoretic-based and statistical methods from participants’ SPECT data. The regions found in this study align with brain regions reported in the literature. These findings support the future use of brain imaging and SVM-based classifier in the diagnosis of substance use disorders and furthering an understanding of their underlying pathology.

1 October 2012 in Computerized Medical Imaging and Graphics
Verified
Journal Article
Closed access
MMMutlu Mete
Mutlu Mete
NSNikolay Metodiev Sirakov
Nikolay Metodiev Sirakov

1 May 2018 in The Journal of Heart and Lung Transplantation
Verified
Journal Article
Open access
VAVenkatesh K. Ariyamuthu
Venkatesh K. Ariyamuthu
AAAlpesh A. Amin
Alpesh A. Amin
MDMark H. Drazner
Mark H. Drazner
FAFaris Araj
Faris Araj
PMPradeep P.A. Mammen
Pradeep P.A. Mammen
BTBekir Tanriover
Bekir Tanriover
Induction therapy in simultaneous heart-kidney transplantation (SHKT) is not well studied in the setting of contemporary maintenance immunosuppression consisting of tacrolimus (TAC), mycophenolic acid (MPA), and prednisone (PRED). We analyzed the Organ Procurement and Transplant Network registry from January 1, 2000, to March 3, 2015, for recipients of SHKT (N = 623) maintained on TAC/MPA/PRED at hospital discharge. The study cohort was further stratified into 3 groups by induction choice: induction (n = 232), rabbit anti-thymoglobulin (r-ATG; n = 204), and interleukin-2 receptor-α (n = 187) antagonists. Survival rates were estimated using the Kaplan-Meier estimator. Multivariable inverse probability weighted Cox proportional hazard regression models were used to assess hazard ratios associated with post-transplant mortality as the primary outcome. The study cohort was censored on March 4, 2016, to allow at least 1-year of follow-up. During the study period, the number of SHKTs increased nearly 5-fold. The Kaplan-Meier survival curve showed superior outcomes with r-ATG compared with no induction or interleukin-2 receptor-α induction. Compared with the no-induction group, an inverse probability weighted Cox proportional hazard model showed no independent association of induction therapy with the primary outcome. In sub-group analysis, r-ATG appeared to lower mortality in sensitized patients with panel reactive antibody of 10% or higher (hazard ratio, 0.19; 95% confidence interval, 0.05-0.71). r-ATG may provide a survival benefit in SHKT, especially in sensitized patients maintained on TAC/MPA/PRED at hospital discharge.

16 October 2023 in IEEE Journal of Emerging and Selected Topics in Industrial Electronics
Verified
Journal Article
Closed access
RRRamin Rajabioun
Ramin Rajabioun
MAMojtaba Afshar
Mojtaba Afshar
MMMutlu Mete
Mutlu Mete
ÖAÖZKAN ATAN
ÖZKAN ATAN
BABilal Akin
Bilal Akin
Distributed bearing faults are highly common in industrial applications and display unpredictable vibration patterns impeding their detection. These faults stem from issues such as lubrication deficiencies, contamination, electrical erosion, roughness of the bearing surface, or the propagation of localized faults. This study aims to detect distributed bearing faults by utilizing a multi-sensory approach consisting of current, accelerometer, and fluxgate sensors. A novel 2D deep learning framework is proposed, leveraging signals from six distinct sources, including three-axis vibration signals, stray magnetic flux signal, and two phase-current signals. Data is collected from 3 hp and 10 hp induction motors at 50 operational points, spanning 10 speed levels and 5 torque levels. These six signals are transformed into matrices and combined to create a comprehensive matrix that provides an overall depiction of the bearing condition. The proposed deep learning architecture employs a 2D convolutional model, which takes 2D images as input and determines the bearing status. To evaluate the system's robustness, the data is divided into training and testing sets. The proposed model demonstrates remarkable effectiveness in detecting distributed bearing faults, achieving an impressive accuracy rate of 99.92%. Furthermore, a comprehensive comparison is provided, highlighting the impact of using various sets of inputs as sources for the deep learning model on the accuracy rate for each set. Through the analysis of the obtained results, a clear conclusion can be drawn: the model performs at its best when all six input sources are utilized.

4 May 2023 in Abdominal Radiology
Verified
Journal Article
Closed access
PDF file
LCLuis F. Calimano-Ramirez
Luis F. Calimano-Ramirez
MVMAYUR VIRARKAR
MAYUR VIRARKAR
MHMauricio Hernandez
Mauricio Hernandez
SOSavas Ozdemir
Savas Ozdemir
SKSindhu Kumar
Sindhu Kumar
KGKazim Ziya Gumus
Kazim Ziya Gumus

14 March 2019 in BMC Bioinformatics
Verified
Journal Article
Open access
PDF file
MBMustafa Bayraktar
Mustafa Bayraktar
SKSinan Kockara
Sinan Kockara
THTansel Halic
Tansel Halic
MMMutlu Mete
Mutlu Mete
Henry K WongHenry K Wong
Henry K Wong
Kamran IqbalKamran Iqbal
Kamran Iqbal
Dermoscopy is one of the common and effective imaging techniques in diagnosis of skin cancer, especially for pigmented lesions. Accurate skin lesion border detection is the key to extract important dermoscopic features of the skin lesion. In current clinical settings, border delineation is performed manually by dermatologists. Operator based assessments lead to intra- and inter-observer variations due to its subjective nature. Moreover it is a tedious process. Because of aforementioned hurdles, the automation of lesion boundary detection in dermoscopic images is necessary. In this study, we address this problem by developing a novel skin lesion border detection method with a robust edge indicator function, which is based on a meshless method. Our results are compared with the other image segmentation methods. Our skin lesion border detection algorithm outperforms other state-of-the-art methods. Based on dermatologist drawn ground truth skin lesion borders, the results indicate that our method generates reasonable boundaries than other prominent methods having Dice score of 0.886 ±0.094 and Jaccard score of 0.807 ±0.133. We prove that smoothed particle hydrodynamic (SPH) kernels can be used as edge features in active contours segmentation and probability map can be employed to avoid the evolving contour from leaking into the object of interest.