Jason Kirby

Prof. Jason Kirby


Research Focus & Metrics

Academic Career Length

16Years (2011-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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2 November 2020 in Biological Reviews
Verified
Journal Article
Closed access
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MWMartyn Waller
Martyn Waller
JKJason Kirby
Jason Kirby

24 August 2011 in Journal of Quaternary Science
Verified
Journal Article
Closed access
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KEKevin John Edwards
Kevin John Edwards
JSJ. Edward Schofield
J. Edward Schofield
JKJason Kirby
Jason Kirby
GCGordon T. Cook
Gordon T. Cook

11 August 2022 in World Journal of Microbiology and Biotechnology
Verified
Journal Article
Open access
PDF file
APA. Polrot
A. Polrot
JKJason Kirby
Jason Kirby
FOF. J. Olorunniji
F. J. Olorunniji
JBJ. W. Birkett
J. W. Birkett
GSG. P. Sharples
G. P. Sharples
Standard methods of microbial cultivation only enable the isolation of a fraction of the total environmental bacteria. Numerous techniques have been developed to increase the success of isolation and cultivation in the laboratory, some of which derive from diffusion chambers. In a diffusion chamber, environmental bacteria in agar medium are put back in the environment to grow as close to their natural conditions as possible, only separated from the environment by semi-permeable membranes. In this study, the iChip, a device that possesses hundreds of mini diffusion chambers, was used to isolate tributyltin (TBT) resistant and degrading bacteria. IChip was shown to be efficient at increasing the number of cultivable bacteria compared to standard methods. TBT-resistant strains belonging to Oceanisphaera sp., Pseudomonas sp., Bacillus sp. and Shewanella sp. were identified from Liverpool Dock sediment. Among the isolates in the present study, only members of Pseudomonas sp. were able to use TBT as a sole carbon source. It is the first time that members of the genus Oceanisphaera have been shown to be TBT-resistant. Although iChip has been used in the search for molecules of biomedical interest here we demonstrate its promising application in bioremediation.

29 April 2023 in The Holocene
Verified
Journal Article
Open access
JKJason Kirby
Jason Kirby
EGEd Garrett
Ed Garrett
WGW Roland Gehrels
W Roland Gehrels
The late-Quaternary relative sea-level (RSL) history of Ireland is complex, positioned at the margins of the former British-Irish Ice Sheet, and subject to the influence of ice unloading and forebulge collapse. Geophysical models of post-glacial isostatic adjustment (GIA) provide estimates of the pattern of RSL change since deglaciation which may be tested and validated with empirical data from proxy records. For the region of northwest Ireland, there is a paucity of high-quality RSL data and, therefore, equivocal evidence to support the GIA models that predict a mid to Late-Holocene RSL highstand of between +0.5 and +2 m above present. This study aims to investigate this model-data discrepancy by reconstructing RSL change from a near continuous salt-marsh sequence at Bracky Bridge, Donegal, spanning the last ca. 2500 years. We develop a transfer function model to reconstruct the vertical position of sea level using a regional diatom training set to quantify the indicative meaning and predict the palaeomarsh elevation of the core samples. A chronology is provided by a combination of14C and210Pb data, with sample specific ages derived from an age-depth model using a Bayesian framework. Our reconstruction shows ca. 2 m of relative sea-level rise in the past 2500 years. This is not compatible with some previously published sea-level index points from the region, which we re-interpret as freshwater/terrestrial limiting data. These results do not provide any evidence to support a Mid-Holocene RSL highstand above present sea level. Whilst none of the available GIA models replicate the timing and magnitude of the Late-Holocene RSL rise in our reconstruction, those which incorporate a thick and extensive British-Irish Sea Ice Sheet provide the best fit.

27 December 2023 in Vegetation History and Archaeobotany
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Journal Article
Open access
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EAEline N. van Asperen
Eline N. van Asperen
JKJason Kirby
Jason Kirby
HSHelen E. Shaw
Helen E. Shaw
Pollen diagrams covering the Bronze Age to Roman period from northeast Northumberland are scarce. We present a 14C-dated pollen record from a peat-filled forest hollow in Chillingham Wild Cattle Park, northeast Northumberland, that spans the Iron Age. For the first time for this part of Northumberland, fungal spores are also analysed to investigate whether clearances took place in the context of crop cultivation or pastoralism. The pollen diagram shows significant woodland cover during the Late Bronze Age, with small-scale landscape openness potentially representing crop cultivation and animal grazing under a tree canopy. A local clearance event, with arboreal pollen falling to 13.2%, is radiocarbon dated to the late Early to Middle Iron Age, likely coinciding with the construction and occupancy of the nearby Ros Castle hillfort. A significant rise in dung fungal spores and the presence of Plantago and other open vegetation taxa indicate animal husbandry played an important role in this clearance phase. A subsequent large decrease in dung fungi and a small rise in arboreal pollen may reflect a degree of abandonment of the area after the climate cooled. Peat formation ceased in the late Middle to Late Iron Age as the hollow filled up. Limited renewed peat growth occurred in the last century or so, after peat shrinkage due to drying and consequent oxidation provided the possibility for renewed peat formation within the hollow.

7 July 2022 in The Holocene
Verified
Journal Article
Open access
LBLouise Best
Louise Best
JKJason Kirby
Jason Kirby
KSKatherine Selby
Katherine Selby
Estuaries are at the interface of marine and terrestrial systems and as such, are subject to environmental change arising from multiple driving mechanisms, with the interplay between the dominant controls varying spatially and temporally. Relative sea-level (RSL) change and sediment supply can play a significant role in driving environmental change. This study examines the relative influence of these drivers during the Holocene. Biostratigraphic records and RSL data are presented from two locations in the inner portion and upper reaches of the macrotidal Humber Estuary, eastern England. The results provide a new terrestrial limiting point and six sea-level index points, two of which at c. 1500 cal years BP provide the youngest sea-level index points for the inner estuary. An early-mid Holocene tidal lagoon system, that lacks modern equivalent, is recorded at one site. The results indicate a shift in the dominance of RSL rise driving the early Holocene creation of wetlands, to sediment supply dominating changes in the mid-late Holocene against the backdrop of a reduced rate of RSL rise, with a submergence of wetlands evident after c. 4000 cal years BP. The persistence of fen carr evident between c. 6800 and 5500 cal years BP suggests stability and resilience of the peatland system to continuing RSL rise. As rates of contemporary RSL rise increase, combined with climate and human impacts on the landscape, the drivers of change in these type of estuary systems will shift, with the records providing analogues of potential system responses that can help inform coastal management strategies.