Muhammad Asim Raza basra

Muhammad Asim Raza basra


Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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26 July 2016 in Molecular Psychiatry
Verified
Journal Article
Open access
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SRS Riazuddin
S Riazuddin
MHM Hussain
M Hussain
ARA Razzaq
A Razzaq
ZIZafar Iqbal
Zafar Iqbal
MOHSIN SHAHZADMOHSIN SHAHZAD
MOHSIN SHAHZAD
Hans Van BokhovenHans Van Bokhoven
Hans Van Bokhoven
Intellectual disability (ID) is a clinically and genetically heterogeneous disorder, affecting 1–3% of the general population. Although research into the genetic causes of ID has recently gained momentum, identification of pathogenic mutations that cause autosomal recessive ID (ARID) has lagged behind, predominantly due to non-availability of sizeable families. Here we present the results of exome sequencing in 121 large consanguineous Pakistani ID families. In 60 families, we identified homozygous or compound heterozygous DNA variants in a single gene, 30 affecting reported ID genes and 30 affecting novel candidate ID genes. Potential pathogenicity of these alleles was supported by co-segregation with the phenotype, low frequency in control populations and the application of stringent bioinformatics analyses. In another eight families segregation of multiple pathogenic variants was observed, affecting 19 genes that were either known or are novel candidates for ID. Transcriptome profiles of normal human brain tissues showed that the novel candidate ID genes formed a network significantly enriched for transcriptional co-expression (P<0.0001) in the frontal cortex during fetal development and in the temporal–parietal and sub-cortex during infancy through adulthood. In addition, proteins encoded by 12 novel ID genes directly interact with previously reported ID proteins in six known pathways essential for cognitive function (P<0.0001). These results suggest that disruptions of temporal parietal and sub-cortical neurogenesis during infancy are critical to the pathophysiology of ID. These findings further expand the existing repertoire of genes involved in ARID, and provide new insights into the molecular mechanisms and the transcriptome map of ID.

1 November 2015 in The American Journal of Human Genetics
Verified
Journal Article
Closed access
Muhammad Hashim RazaMuhammad Hashim Raza
Muhammad Hashim Raza
RMRafael Mattera
Rafael Mattera
RMRobert James Morell
Robert James Morell
ESEduardo Sainz
Eduardo Sainz
RRRachel Rahn
Rachel Rahn
DDDennis Drayna
Dennis Drayna

1 January 2014 in The American Journal of Human Genetics
Verified
Journal Article
Closed access
ARAtteeq U. Rehman
Atteeq U. Rehman
RSRegie Lyn P. Santos-Cortez
Regie Lyn P. Santos-Cortez
RMRobert James Morell
Robert James Morell
MDMeghan C. Drummond
Meghan C. Drummond
TITaku Ito
Taku Ito
TFThomas Friedman
Thomas Friedman

1 June 2018 in Molecular Therapy Nucleic Acids
Verified
Journal Article
Open access
YAYasir Arfat
Yasir Arfat
MBMuhammad Asim Raza basra
Muhammad Asim Raza basra
MSMuhammad Shahzad
Muhammad Shahzad
KMKashif Majeed
Kashif Majeed
NMNasir Mahmood
Nasir Mahmood
HMHina Munir
Hina Munir
Emerging evidence indicates that many microRNAs (miRNAs) are indispensable regulators of osteoblast differentiation and bone formation. However, the role of miRNAs in mechanotransduction of osteoblasts remains to be elucidated. This study aimed to identify a mechanosensitive miRNA that regulates Activin A receptor type I (ACVR1)-induced osteogenic differentiation. After 4 weeks of hindlimb unloading (HLU) suspension of 6-month-old male C57BL/6J mice, femurs and tibias were harvested to extract total bone RNAs. Elevated levels of miR-208a-3p correlated with a lower degree of bone formation in whole-bone samples of HLU mice. However, in vitro overexpression of miR-208a-3p inhibited osteoblast differentiation, whereas silencing of miR-208a-3p by antagomiR-208a-3p promoted expression of osteoblast activity, bone formation marker genes, and matrix mineralization under mechanical unloading condition. Bioinformatics analysis and a luciferase assay revealed that ACVR1 is a target gene of miR-208a-3p that negatively regulates osteoblast differentiation under mechanical unloading environment. Further, this study also demonstrates that in vivo pre-treatment with antagomiR-208a-3p led to an increase in bone formation and trabecular microarchitecture and partly rescued the bone loss caused by mechanical unloading. Collectively, these results suggest that in vivo, inhibition of miRNA-208a-3p by antagomiR-208a-3p may be a potential therapeutic strategy for ameliorating bone loss.

1 July 2015 in European Journal of Human Genetics
Verified
Journal Article
Closed access
MRM Hashim Raza
M Hashim Raza
CDCarlos E F Domingues
Carlos E F Domingues
RWRonald Webster
Ronald Webster
ESEduardo Sainz
Eduardo Sainz
EPEmily Paris
Emily Paris
DDDennis Drayna
Dennis Drayna

Verified
Journal Article
Open access
PDF file
MBMajda Batool
Majda Batool
ATAffifa Tajammal
Affifa Tajammal
FFFirdous Farhat
Firdous Farhat
Francis VerpoortFrancis Verpoort
Francis Verpoort
ZKZafar A. K. Khattak
Zafar A. K. Khattak
MBMuhammad Asim Raza basra
Muhammad Asim Raza basra
A new series of 1,3,4-oxadiazoles derivatives was synthesized, characterized, and evaluated for their in vitro and in vivo anti-thrombotic activity. Compounds (3a–3i) exhibited significant clot lysis with respect to reference drug streptokinase (30,000 IU), and enhanced clotting time (CT) values (130–342 s) than heparin (110 s). High affinity towards 1NFY with greater docking score was observed for the compounds (3a, 3i, 3e, 3d, and 3h) than the control ligand RPR200095. In addition, impressive inhibitory potential against factor Xa (F-Xa) was observed with higher docking scores (5612–6270) with Atomic Contact Energy (ACE) values (−189.68 to −352.28 kcal/mol) than the control ligand RPR200095 (Docking score 5192; ACE −197.81 kcal/mol). In vitro, in vivo, and in silico results proposed that these newly synthesized compounds might be used as anticoagulant agents.