Tea plants are frequently threatened by insect pests, resulting in substantial yield and quality losses. Methyl jasmonate (MeJA) is a key defense signaling molecule in plants; however, its integrated effects on tea plant growth, resistance, and quality-related traits remain poorly understood. In this study, field experiments were conducted to evaluate the effects of exogenous MeJA at different concentration (0.02–20 mM) on growth traits, quality components, and resistance to the tea green leafhopper and tea orange gall mite in Camellia sinensis ‘Zhongcha 108’, and transcriptome analysis was further integrated to elucidate the underlying molecular mechanisms. The results showed that appropriate MeJA concentrations (0.2–2 mM) significantly optimized bud morphology, characterized by shortened internodes, thicker stems, and reduced leaf insertion angles. Importantly, these treatments did not significantly alter the measured quality-related biochemical components, such as free amino acids and soluble sugars, within the evaluated time frame. Collectively, this study provides the first field-based evidence defining an effective MeJA concentration window that balances pest resistance induction, growth modulation, and processing suitability for flat-type green tea, offering practical guidance for the rational application of MeJA in tea plantation management.