Ruohe Yin

Prof. Dr. Ruohe Yin


Research Focus & Metrics

Academic Career Length

17Years (2010-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 January 2013 in The Arabidopsis Book
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Journal Article
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KTKimberley Tilbrook
Kimberley Tilbrook
AAAdriana B. Arongaus
Adriana B. Arongaus
MBMelanie Binkert
Melanie Binkert
MHMarc Heijde
Marc Heijde
RYRuohe Yin
Ruohe Yin
RURoman Ulm
Roman Ulm
Ultraviolet-B radiation (UV-B) is an intrinsic part of sunlight that is accompanied by significant biological effects. Plants are able to perceive UV-B using the UV-B photoreceptor UVR8 which is linked to a specific molecular signaling pathway and leads to UV-B acclimation. Herein we review the biological process in plants from initial UV-B perception and signal transduction through to the known UV-B responses that promote survival in sunlight. The UVR8 UV-B photoreceptor exists as a homodimer that instantly monomerises upon UV-B absorption via specific intrinsic tryptophans which act as UV-B chromophores. The UVR8 monomer interacts with COP1, an E3 ubiquitin ligase, initiating a molecular signaling pathway that leads to gene expression changes. This signaling output leads to UVR8-dependent responses including UV-B-induced photomorphogenesis and the accumulation of UV-B-absorbing flavonols. Negative feedback regulation of the pathway is provided by the WD40-repeat proteins RUP1 and RUP2, which facilitate ...

1 June 2017 in Current Opinion in Plant Biology
Verified
Journal Article
Closed access
RYRuohe Yin
Ruohe Yin
RURoman Ulm
Roman Ulm

16 January 2012 in Journal of Experimental Botany
Verified
Journal Article
Open access
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RYRuohe Yin
Ruohe Yin
BMBurkhard Messner
Burkhard Messner
TFTheresa Faus-Kessler
Theresa Faus-Kessler
THThomas Hoffmann
Thomas Hoffmann
WSWilfried Schwab
Wilfried Schwab
ASAnton Schäffner
Anton Schäffner
Flavonols, phenylalanine-derived secondary metabolites, have protective and regulatory functions in plants. In Arabidopsis thaliana, they are consecutively glycosylated at their 3-OH and 7-OH groups. UGT78D1 and UGT78D2 are the major flavonol 3-O-glycosyltransferases in Arabidopsis leaves. The ugt78d1 ugt78d2 double mutant, which was strongly compromised in the initial 3-O-glycosylation, showed a severe and specific repression of flavonol biosynthesis, retaining only one-third of the wild-type level. This metabolic phenotype was associated with a repressed transcription of several flavonol biosynthetic genes including the committed step chalcone synthase [(CHS) or TRANSPARENT TESTA 4 (TT4)]. Furthermore, the committed step of the upstream, general phenylpropanoid pathway, phenylalanine ammonia-lyase (PAL), was down-regulated in its enzyme activity and in the transcription of the flavonol-related PAL1 and PAL2. However, a complete blocking of flavonoid biosynthesis at CHS released PAL inhibition in a tt4 ugt78d1 ugt78d2 line. PAL activity was even enhanced in the flavonol synthase 1 mutant, which compromises the final formation of flavonol aglycones. The dependence of the PAL feedback inhibition on flavonols was confirmed by chemical complementation of tt4 ugt78d1 ugt78d2 using naringenin, a downstream flavonoid intermediate, which restored the PAL repression. Although aglycones were not analytically detectable, this study provides genetic evidence for a novel, flavonol-dependent feedback inhibition of the flavonol biosynthetic pathway and PAL. It was conditioned by the compromised flavonol-3-O-conjugation and a decrease in flavonol content, yet dependent on a residual, flavonol synthase 1 (FLS1)-related capacity to form flavonol aglycones. Thus, this regulation would not react to a reduced metabolic flux into flavonol biosynthesis, but it might prevent the accumulation of non-glycosylated, toxic flavonols.

25 October 2013 in New Phytologist
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Journal Article
Open access
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RYRuohe Yin
Ruohe Yin
KHKerstin Han
Kerstin Han
WHWerner Heller
Werner Heller
AAAndreas Albert
Andreas Albert
PDPetre I. Dobrev
Petre I. Dobrev
ASAnton Schäffner
Anton Schäffner
Summary: Polar auxin transport (PAT) plays key roles in the regulation of plant growth and development. Flavonoids have been implicated in the inhibition of PAT. However, the active flavonoid derivative(s) involved in this process in vivo has not yet been identified. Here, we provide evidence that a specific flavonol bis‐glycoside is correlated with shorter plant stature and reduced PAT. Specific flavonoid‐biosynthetic or flavonoid‐glycosylating steps were genetically blocked in Arabidopsis thaliana. The differential flavonol patterns established were analyzed by high‐performance liquid chromatography (HPLC) and related to altered plant stature. PAT was monitored in stem segments using a radioactive [3H]‐indole‐3‐acetic acid tracer. The flavonoid 3‐O‐glucosyltransferase mutant ugt78d2 exhibited a dwarf stature in addition to its altered flavonol glycoside pattern. This was accompanied by reduced PAT in ugt78d2 shoots. The ugt78d2‐dependent growth defects were flavonoid dependent, as they were rescued by genetic blocking of flavonoid biosynthesis. Phenotypic and metabolic analyses of a series of mutants defective at various steps of flavonoid formation narrowed down the potentially active moiety to kaempferol 3‐O‐rhamnoside‐7‐O‐rhamnoside. Moreover, the level of this compound was negatively correlated with basipetal auxin transport. These results indicate that kaempferol 3‐O‐rhamnoside‐7‐O‐rhamnoside acts as an endogenous PAT inhibitor in Arabidopsis shoots.

28 March 2016 in The Plant Cell
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Journal Article
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KTKimberley Tilbrook
Kimberley Tilbrook
MDMarine Dubois
Marine Dubois
CCCarlos D. Crocco
Carlos D. Crocco
RYRuohe Yin
Ruohe Yin
RCRichard Chappuis
Richard Chappuis
RURoman Ulm
Roman Ulm
The single-cell photosynthetic green alga Chlamydomonas reinhardtii contains a conserved UV-B photoreceptor pathway and acclimates to UV-B.

12 July 2016 in Proceedings of the National Academy of Sciences
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Journal Article
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RYRuohe Yin
Ruohe Yin
MSMariya Y. Skvortsova
Mariya Y. Skvortsova
SLSylvain Loubéry
Sylvain Loubéry
RURoman Ulm
Roman Ulm
The UV-B photoreceptor UV RESISTANCE LOCUS 8 (UVR8) promotes UV-B acclimation and tolerance in Arabidopsis thaliana. UVR8 localizes to both cytosol and nucleus, but its main activity is assumed to be nuclear. UV-B photoreception stimulates nuclear accumulation of UVR8 in a presently unknown manner. Here, we show that CONSTITUTIVELY PHOTOMORPHOGENIC 1 (COP1) is required for UV-B–induced nuclear accumulation of UVR8, but bypassing the COP1 requirement for UVR8 nuclear accumulation did not rescue the cop1 mutant UV-B phenotype. Using a glucocorticoid receptor (GR)-based fusion protein system to conditionally localize GR-UVR8 to the nucleus, we have demonstrated that both photoactivation and nuclear localization of UVR8 are required for UV-B–induced photomorphogenic responses. In contrast, there was no UV-B response when UV-B–activated UVR8 was artificially retained in the cytosol. In agreement with a predominantly nuclear activity, constitutively active UVR8W285A accumulated in the nucleus also in the absence of UV-B. Furthermore, GR-COP1 expression lines suggested that UV-B–activated UVR8 can be coimported into the nucleus by COP1. Our data strongly support localization of UVR8 signaling in the nucleus and a dual role for COP1 in the regulation of UV-B–induced UVR8 nuclear accumulation and in UVR8-mediated UV-B signaling.