Ioannis Anagnostopoulos

Prof. Ioannis Anagnostopoulos

orcid

Research Focus & Metrics

Academic Career Length

19Years (2008-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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22 June 2022 in Leukemia
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Journal Article
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RARita Alaggio
Rita Alaggio
CACatalina Amador
Catalina Amador
IAIoannis Anagnostopoulos
Ioannis Anagnostopoulos
AAAyoma D. Attygalle
Ayoma D. Attygalle
IAIguaracyra Barreto de Oliveira Araujo
Iguaracyra Barreto de Oliveira Araujo
WXWenbin Xiao
Wenbin Xiao
We herein present an overview of the upcoming 5thedition of the World Health Organization Classification of Haematolymphoid Tumours focussing on lymphoid neoplasms. Myeloid and histiocytic neoplasms will be presented in a separate accompanying article. Besides listing the entities of the classification, we highlight and explain changes from the revised 4thedition. These include reorganization of entities by a hierarchical system as is adopted throughout the 5thedition of the WHO classification of tumours of all organ systems, modification of nomenclature for some entities, revision of diagnostic criteria or subtypes, deletion of certain entities, and introduction of new entities, as well as inclusion of tumour-like lesions, mesenchymal lesions specific to lymph node and spleen, and germline predisposition syndromes associated with the lymphoid neoplasms.

19 July 2023 in Leukemia
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Journal Article
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RARita Alaggio
Rita Alaggio
CACatalina Amador
Catalina Amador
IAIoannis Anagnostopoulos
Ioannis Anagnostopoulos
AAAyoma D. Attygalle
Ayoma D. Attygalle
IAIguaracyra Barreto de Oliveira Araujo
Iguaracyra Barreto de Oliveira Araujo
WXWenbin Xiao
Wenbin Xiao

1 September 2021 in The Journal of Molecular Diagnostics
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Journal Article
Open access
MBMichiel van Den Brand
Michiel van Den Brand
JRJos Rijntjes
Jos Rijntjes
MMMarkus Möbs
Markus Möbs
JSJulia Steinhilber
Julia Steinhilber
MKMichèle Y. van der Klift
Michèle Y. van der Klift
PGPatricia J.T.A. Groenen
Patricia J.T.A. Groenen
Ig gene (IG) clonality analysis has an important role in the distinction of benign and malignant B-cell lymphoid proliferations and is mostly performed with the conventional EuroClonality/BIOMED-2 multiplex PCR protocol and GeneScan fragment size analysis. Recently, the EuroClonality-NGS Working Group developed a method for next-generation sequencing (NGS)-based IG clonality analysis. Herein, we report the results of an international multicenter biological validation of this novel method compared with the gold standard EuroClonality/BIOMED-2 protocol, based on 209 specimens of reactive and neoplastic lymphoproliferations. NGS-based IG clonality analysis showed a high interlaboratory concordance (99%) and high concordance with conventional clonality analysis (98%) for the molecular conclusion. Detailed analysis of the individual IG heavy chain and kappa light chain targets showed that NGS-based clonality analysis was more often able to detect a clonal rearrangement or yield an interpretable result. NGS-based and conventional clonality analysis detected a clone in 96% and 95% of B-cell neoplasms, respectively, and all but one of the reactive cases were scored polyclonal. We conclude that NGS-based IG clonality analysis performs comparable to conventional clonality analysis. We provide critical parameters for interpretation and discuss a first step toward a quantitative scoring approach for NGS clonality results. Considering the advantages of NGS-based clonality analysis, including its high sensitivity and possibilities for accurate clonal comparison, this supports implementation in diagnostic practice.

7 November 2023 in Nature Communications
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NSNikolai Schleussner
Nikolai Schleussner
PCPierre Cauchy
Pierre Cauchy
VFVedran Franke
Vedran Franke
MGMaciej Giefing
Maciej Giefing
OFOriol Fornes
Oriol Fornes
SMStephan Mathas
Stephan Mathas
Disease-causing mutations in genes encoding transcription factors (TFs) can affect TF interactions with their cognate DNA-binding motifs. Whether and how TF mutations impact upon the binding to TF composite elements (CE) and the interaction with other TFs is unclear. Here, we report a distinct mechanism of TF alteration in human lymphomas with perturbed B cell identity, in particular classic Hodgkin lymphoma. It is caused by a recurrent somatic missense mutation c.295 T > C (p.Cys99Arg; p.C99R) targeting the center of the DNA-binding domain of Interferon Regulatory Factor 4 (IRF4), a key TF in immune cells. IRF4-C99R fundamentally alters IRF4 DNA-binding, with loss-of-binding to canonical IRF motifs and neomorphic gain-of-binding to canonical and non-canonical IRF CEs. IRF4-C99R thoroughly modifies IRF4 function by blocking IRF4-dependent plasma cell induction, and up-regulates disease-specific genes in a non-canonical Activator Protein-1 (AP-1)-IRF-CE (AICE)-dependent manner. Our data explain how a single mutation causes a complex switch of TF specificity and gene regulation and open the perspective to specifically block the neomorphic DNA-binding activities of a mutant TF.

7 October 2008 in International Journal of Hematology
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Katja WeiselKatja Weisel
Katja Weisel
EWEckhart Weidmann
Eckhart Weidmann
IAIoannis Anagnostopoulos
Ioannis Anagnostopoulos
LKLothar Kanz
Lothar Kanz
APAntonio Pezzutto
Antonio Pezzutto
Marion SubkleweMarion Subklewe
Marion Subklewe

30 August 2023 in Leukemia
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Journal Article
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FBFranziska Briest
Franziska Briest
DNDaniel Noerenberg
Daniel Noerenberg
CHCornelius Hennch
Cornelius Hennch
KYKenichi Yoshida
Kenichi Yoshida
RHRaphael Hablesreiter
Raphael Hablesreiter
FDFrederik Damm
Frederik Damm
Recent exome-wide studies discovered frequent somatic mutations in the epigenetic modifier ZNF217 in primary mediastinal B cell lymphoma (PMBCL) and related disorders. As functional consequences of ZNF217 alterations remain unknown, we comprehensively evaluated their impact in PMBCL. Targeted sequencing identified genetic lesions affecting ZNF217 in 33% of 157 PMBCL patients. Subsequent gene expression profiling (n = 120) revealed changes in cytokine and interferon signal transduction in ZNF217-aberrant PMBCL cases. In vitro, knockout of ZNF217 led to changes in chromatin accessibility interfering with binding motifs for crucial lymphoma-associated transcription factors. This led to disturbed expression of interferon-responsive and inflammation-associated genes, altered cell behavior, and aberrant differentiation. Mass spectrometry demonstrates that ZNF217 acts within a histone modifier complex containing LSD1, CoREST and HDAC and interferes with H3K4 methylation and H3K27 acetylation. Concluding, our data suggest non-catalytic activity of ZNF217, which directs histone modifier complex function and controls B cell differentiation-associated patterns of chromatin structure.