Ajit G Thomas

Dr. Ajit G Thomas

orcid

Research Focus & Metrics

Academic Career Length

11Years (2016-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
16 November 2022 in Science Advances
Verified
Journal Article
Open access
RRRana Rais
Rana Rais
KLKathryn Lemberg
Kathryn Lemberg
LTLukáš Tenora
Lukáš Tenora
MAMatthew Arwood
Matthew Arwood
APArindom Pal
Arindom Pal
BSBarbara S. Slusher
Barbara S. Slusher
6-Diazo-5-oxo- l -norleucine (DON) is a glutamine antagonist that suppresses cancer cell metabolism but concurrently enhances the metabolic fitness of tumor CD8 + T cells. DON showed promising efficacy in clinical trials; however, its development was halted by dose-limiting gastrointestinal (GI) toxicities. Given its clinical potential, we designed DON peptide prodrugs and found DRP-104 [isopropyl( S )-2-(( S )-2-acetamido-3-(1 H -indol-3-yl)-propanamido)-6-diazo-5-oxo-hexanoate] that was preferentially bioactivated to DON in tumor while bioinactivated to an inert metabolite in GI tissues. In drug distribution studies, DRP-104 delivered a prodigious 11-fold greater exposure of DON to tumor versus GI tissues. DRP-104 affected multiple metabolic pathways in tumor, including decreased glutamine flux into the TCA cycle. In efficacy studies, both DRP-104 and DON caused complete tumor regression; however, DRP-104 had a markedly improved tolerability profile. DRP-104’s effect was CD8 + T cell dependent and resulted in robust immunologic memory. DRP-104 represents a first-in-class prodrug with differential metabolism in target versus toxicity tissue. DRP-104 is now in clinical trials under the FDA Fast Track designation.

4 August 2016 in JCI Insight
Verified
Journal Article
Open access
PDF file
RRRana Rais
Rana Rais
WJWeiwei Jiang
Weiwei Jiang
HZHui-hong Zhai
Hui-hong Zhai
KWKrystyna M. Wozniak
Krystyna M. Wozniak
MSMarigo Stathis
Marigo Stathis
BSBarbara S. Slusher
Barbara S. Slusher
Recent gene-profiling analyses showed significant upregulation of the folate hydrolase ( FOLH1 ) gene in the affected intestinal mucosa of patients with inflammatory bowel disease (IBD). The FOLH1 gene encodes a type II transmembrane glycoprotein termed glutamate carboxypeptidase II (GCPII). To establish that the previously reported increased gene expression was functional, we quantified the glutamate carboxypeptidase enzymatic activity in 31 surgical specimens and report a robust 2.8- to 41-fold increase in enzymatic activity in the affected intestinal mucosa of IBD patients compared with an uninvolved area in the same patients or intestinal mucosa from healthy controls. Using a human-to-mouse approach, we next showed a similar enzymatic increase in two well-validated IBD murine models and evaluated the therapeutic effect of the potent FOLH1 /GCPII inhibitor 2-phosphonomethyl pentanedioic acid (2-PMPA) (IC 50 = 300 pM). In the dextran sodium sulfate (DSS) colitis model, 2-PMPA inhibited the GCPII activity in the colonic mucosa by over 90% and substantially reduced the disease activity. The significance of the target was confirmed in FOLH1 –/– mice who exhibited resistance to DSS treatment. In the murine IL-10 –/– model of spontaneous colitis, daily 2-PMPA treatment also significantly reduced both macroscopic and microscopic disease severity. These results provide the first evidence of FOLH1 /GCPII enzymatic inhibition as a therapeutic option for IBD.

2 October 2020 in Science Advances
Verified
Journal Article
Open access
PDF file
SYSeung-Wan Yoo
Seung-Wan Yoo
AAAmit Agarwal
Amit Agarwal
MSMatthew D. Smith
Matthew D. Smith
SKSaja S. Khuder
Saja S. Khuder
EBEmily G. Baxi
Emily G. Baxi
NHNorman J. Haughey
Norman J. Haughey
Targeting a sphingomyelin hydrolase improves the structure of remyelinated fibers in a mouse model of multiple sclerosis.

22 June 2023 in JCI Insight
Verified
Journal Article
Open access
PDF file
KLKyungho Lee
Kyungho Lee
ETElizabeth A. Thompson
Elizabeth A. Thompson
SGSepideh Gharaie
Sepideh Gharaie
CPChirag H. Patel
Chirag H. Patel
JKJohanna T. Kurzhagen
Johanna T. Kurzhagen
HRHamid Rabb
Hamid Rabb
T cells play an important role in acute kidney injury (AKI). Metabolic programming of T cells regulates their function, is a rapidly emerging field, and is unknown in AKI. We induced ischemic AKI in C57BL/6J mice and collected kidneys and spleens at multiple time points. T cells were isolated and analyzed by an immune-metabolic assay. Unbiased machine learning analyses identified a distinct T cell subset with reduced voltage-dependent anion channel 1 and mTOR expression in post-AKI kidneys. Ischemic kidneys showed higher expression of trimethylation of histone H3 lysine 27 and glutaminase. Splenic T cells from post-AKI mice had higher expression of glucose transporter 1, hexokinase II, and carnitine palmitoyltransferase 1a. Human nonischemic and ischemic kidney tissue displayed similar findings to mouse kidneys. Given a convergent role for glutamine in T cell metabolic pathways and the availability of a relatively safe glutamine antagonist, JHU083, effects on AKI were evaluated. JHU083 attenuated renal injury and reduced T cell activation and proliferation in ischemic and nephrotoxic AKI, whereas T cell–deficient mice were not protected by glutamine blockade. In vitro hypoxia demonstrated upregulation of glycolysis-related enzymes. T cells undergo metabolic reprogramming during AKI, and reconstitution of metabolism by targeting T cell glutamine pathway could be a promising novel therapeutic approach.

28 September 2022 in Pharmaceutics
Verified
Journal Article
Open access
PDF file
CTCarolyn Tallon
Carolyn Tallon
BBBenjamin J Bell
Benjamin J Bell
ASAnjali Sharma
Anjali Sharma
APArindom Pal
Arindom Pal
MMMedhinee M. Malvankar
Medhinee M. Malvankar
BSBarbara S. Slusher
Barbara S. Slusher
Alzheimer’s disease (AD) is characterized by the progressive accumulation of amyloid-β and hyperphosphorylated tau (pTau), which can spread throughout the brain via extracellular vesicles (EVs). Membrane ceramide enrichment regulated by the enzyme neutral sphingomyelinase 2 (nSMase2) is a critical component of at least one EV biogenesis pathway. Our group recently identified 2,6-Dimethoxy-4-(5-Phenyl-4-Thiophen-2-yl-1H-Imidazol-2-yl)-Phenol (DPTIP), the most potent (30 nM) and selective inhibitor of nSMase2 reported to date. However, DPTIP exhibits poor oral pharmacokinetics (PK), modest brain penetration, and rapid clearance, limiting its clinical translation. To enhance its PK properties, we conjugated DPTIP to a hydroxyl-PAMAM dendrimer delivery system, creating dendrimer-DPTIP (D-DPTIP). In an acute brain injury model, orally administered D-DPTIP significantly reduced the intra-striatal IL-1β-induced increase in plasma EVs up to 72 h post-dose, while oral DPTIP had a limited effect. In a mouse tau propagation model, where a mutant hTau (P301L/S320F) containing adeno-associated virus was unilaterally seeded into the hippocampus, oral D-DPTIP (dosed 3× weekly) significantly inhibited brain nSMase2 activity and blocked the spread of pTau to the contralateral hippocampus. These data demonstrate that dendrimer conjugation of DPTIP improves its PK properties, resulting in significant inhibition of EV propagation of pTau in mice. Dendrimer-based delivery of DPTIP has the potential to be an exciting new therapeutic for AD.

4 January 2022 in Neurotherapeutics
Verified
Journal Article
Closed access
PDF file
CTCarolyn Tallon
Carolyn Tallon
ASAnjali Sharma
Anjali Sharma
ZZZhi Zhang
Zhi Zhang
ATAjit G Thomas
Ajit G Thomas
JNJustin Ng
Justin Ng
BSBarbara S. Slusher
Barbara S. Slusher