Sadid Hasan

Dr. Sadid Hasan


Research Focus & Metrics

Academic Career Length

5Years (2022-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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8 May 2022 in Journal of Biomedical Semantics
Verified
Journal Article
Open access
PDF file
LOLucas Emanuel Silva e Oliveira
Lucas Emanuel Silva e Oliveira
APAna Carolina Peters
Ana Carolina Peters
ASAdalniza Moura Pucca da Silva
Adalniza Moura Pucca da Silva
CGCaroline Pilatti Gebeluca
Caroline Pilatti Gebeluca
YGYohan Bonescki Gumiel
Yohan Bonescki Gumiel
CMClaudia Maria Cabral Moro
Claudia Maria Cabral Moro
Background: The high volume of research focusing on extracting patient information from electronic health records (EHRs) has led to an increase in the demand for annotated corpora, which are a precious resource for both the development and evaluation of natural language processing (NLP) algorithms. The absence of a multipurpose clinical corpus outside the scope of the English language, especially in Brazilian Portuguese, is glaring and severely impacts scientific progress in the biomedical NLP field. Methods: In this study, a semantically annotated corpus was developed using clinical text from multiple medical specialties, document types, and institutions. In addition, we present, (1) a survey listing common aspects, differences, and lessons learned from previous research, (2) a fine-grained annotation schema that can be replicated to guide other annotation initiatives, (3) a web-based annotation tool focusing on an annotation suggestion feature, and (4) both intrinsic and extrinsic evaluation of the annotations. Results: This study resulted in SemClinBr, a corpus that has 1000 clinical notes, labeled with 65,117 entities and 11,263 relations. In addition, both negation cues and medical abbreviation dictionaries were generated from the annotations. The average annotator agreement score varied from 0.71 (applying strict match) to 0.92 (considering a relaxed match) while accepting partial overlaps and hierarchically related semantic types. The extrinsic evaluation, when applying the corpus to two downstream NLP tasks, demonstrated the reliability and usefulness of annotations, with the systems achieving results that were consistent with the agreement scores. Conclusion: The SemClinBr corpus and other resources produced in this work can support clinical NLP studies, providing a common development and evaluation resource for the research community, boosting the utilization of EHRs in both clinical practice and biomedical research. To the best of our knowledge, SemClinBr is the first available Portuguese clinical corpus.

3 March 2026 in Sustainability
Verified
Journal Article
Open access
PDF file
BFBabak Jalalzadeh Fard
Babak Jalalzadeh Fard
SHSadid Hasan
Sadid Hasan
JBJesse Eugene Bell
Jesse Eugene Bell
Advances in artificial intelligence (AI), particularly agentic AI, have created opportunities to enhance global sustainability by improving the efficiency and accuracy of environmental monitoring and response systems. Agentic AIs autonomously plan and execute towards specific goals with minimal or no human intervention; however, accessing environmental data is challenging and requires expertise due to inherent fragmentation and the diversity of data formats. The Model Context Protocol (MCP) is an open standard that allows AI systems to securely access and interact with diverse software tools and data sources through unified interfaces, reducing the need for custom integrations while enabling more accurate, context-aware assistance. This study introduces WeatherInfo_MCP, an interface that provides the required expertise for AI agents to access National Weather Service (NWS) data. Built on a service-oriented architecture, the system uses a centralized engine to handle robust geocoding and data extraction while providing AI agents with simple, independent tools to retrieve weather data from the NWS API. The system was validated through 14 unit tests and 23 comprehensive protocol compliance tests against the MCP 2025-06-18 specification, achieving a 100% pass rate across all categories, demonstrating its reliability when working with AI agents. We also successfully tested our model alongside a memory MCP to showcase its performance in a multi-MCP environment. While in its earliest version, WeatherInfo_MCP connects to the NWS API, its modular design and compliance with software development and MCP standards facilitate immediate expansion to additional environmental data and tools. WeatherInfo_MCP is released as an open-source tool to support the sustainable development community, enabling broad adoption of AI agents for environmental use cases.

1 December 2022 in arXiv
Verified
Preprint
Open access
PDF file
BFB. Jalalzadeh Fard
B. Jalalzadeh Fard
SHSadid Hasan
Sadid Hasan
JBJ. E. Bell
J. E. Bell
Climate change is threatening human health in unprecedented orders and many ways. These threats are expected to grow unless effective and evidence-based policies are developed and acted upon to minimize or eliminate them. Attaining such a task requires the highest degree of the flow of knowledge from science into policy. The multidisciplinary, location-specific, and vastness of published science makes it challenging to keep track of novel work in this area, as well as making the traditional knowledge synthesis methods inefficient in infusing science into policy. To this end, we consider developing multiple domain-specific language models (LMs) with different variations from Climate- and Health-related information, which can serve as a foundational step toward capturing available knowledge to enable solving different tasks, such as detecting similarities between climate- and health-related concepts, fact-checking, relation extraction, evidence of health effects to policy text generation, and more. To our knowledge, this is the first work that proposes developing multiple domain-specific language models for the considered domains. We will make the developed models, resources, and codebase available for the researchers.

13 January 2026 in EarthArXiv
Verified
Preprint
Open access
PDF file
BFBabak Jalalzadeh Fard
Babak Jalalzadeh Fard
SHSadid Hasan
Sadid Hasan
JBJesse Eugene Bell
Jesse Eugene Bell
Advances in Artificial Intelligence (AI), particularly agentic AI, have created opportunities to improve efficiency and accuracy in addressing sustainability and environmental problems. Agentic AIs autonomously plan and execute towards specific goals with minimal or no human intervention; however, accessing environmental data is challenging and requires expertise, due to inherent fragmentation and the diversity of data formats. The Model Context Protocol (MCP) is an open standard that allows AI systems to securely access and interact with diverse software tools and data sources through unified interfaces, reducing the need for custom integrations while enabling more accurate, context-aware assistance. This study introduces WeatherInfo_MCP, an interface that provides the required expertise to AI agents to access National Weather Service (NWS) data. Built on a Service-Oriented Architecture, the system uses a centralized engine to handle robust geocoding and data extraction, while providing AI agents with simple, independent tools to retrieve weather data from the NWS API. The system was validated through 14 unit tests and 23 comprehensive protocol compliance tests against the MCP 2025-06-18 specification, achieving a 100% pass rate across all categories, demonstrating its reliability when working with AI agents. We also successfully tested our model alongside a memory MCP to showcase its performance in a multi-MCP environment. While in its earliest version, WeatherInfo_MCP connects to the NWS API, its modular design and compliance with software development and MCP standards facilitate immediate expansion to additional environmental data and tools. WeatherInfo_MCP is released as an open-source tool to enable broad adoption and further development.