Background: Wintersweet (Chimonanthus praecox), an important ornamental plant, has evolved unique fragrant aroma and winter-flowering properties, which are critical for its successful sexual reproduction. However, the molecular mechanisms underlying these traits are largely unknown in this species. In addition, wintersweet is also a typical representative species of the magnoliids, where the phylogenetic position of which relative to eudicots and monocots has not been conclusively resolved. Results: Here, we present a chromosome-level wintersweet genome assembly with a total size of 695.36 Mb and a draft genome assembly of Calycanthus chinensis. Phylogenetic analyses of 17 representative angiosperm genomes suggest that Magnoliids and eudicots are sister to monocots. Whole-genome duplication signatures reveal two major duplication events in the evolutionary history of the wintersweet genome, with an ancient one shared by Laurales, and a more recent one shared by the Calycantaceae. Whole-genome duplication and tandem duplication events have significant impacts on copy numbers of genes related to terpene and benzenoid/phenylpropanoid (the main floral scent volatiles) biosynthesis, which may contribute to the characteristic aroma formation. An integrative analysis combining cytology with genomic and transcriptomic data reveals biological characteristics of wintersweet, such as floral transition in spring, floral organ specification, low temperature-mediated floral bud break, early blooming in winter, and strong cold tolerance. Conclusions: These findings provide insights into the evolutionary history of wintersweet and the relationships among the Magnoliids, monocots, and eudicots; the molecular basis underlying floral scent biosynthesis; and winter flowering, and highlight the utility of multi-omics data in deciphering important ornamental traits in wintersweet.

Expansins, cell-wall loosening proteins, play an important role in plant growth and development and abiotic stress tolerance. Ammopiptanthus nanus (A. nanus) is an important plant to study to understand stress resistance in forestry. In our previous study, two α-type expansins from A. nanus were cloned and named AnEXPA1 and AnEXPA2. In this study, we found that they responded to different abiotic stress and hormone signals. It suggests that they may play different roles in response to abiotic stress. Their promoters show some of the same element responses to abiotic stress and hormones, but some special elements were identified between the expansins that could be essential for their expression. In order to further testify the reliability of the above results, we conducted an analysis of β-glucuronidase (GUS) dyeing. The analysis showed that AnEXPA1 was only induced by cold stress, whereas AnEXPA2 responded to hormone induction. AnEXPA1 and AnEXPA2 transgenic Arabidopsis plants showed better tolerance to cold and drought stresses. Moreover, the ability to scavenge reactive oxygen species (ROS) was significantly improved in the transgenic plants, and expansin activity was enhanced. These results suggested that AnEXPA1 and AnEXPA2 play an important role in the response to abiotic stress. Our research contributes to a better understanding of the regulatory network of expansins and may benefit agricultural production.

Apogamy is a unique asexual reproduction in the ferns, in which somatic cells of gametophytes go through dedifferentiation and then differentiate into haploid sporophytes bypassing fertilization. Restricted to the lack of genomic information, molecular mechanisms of apogamy have remained unclear. Comparative transcriptome analysis was conducted at six stages between sexual reproduction and apogamy in the fern Adiantum reniforme var. sinense, in an effort to identify genes and pathways that might initiate the asexual reproduction. Approximately 928 million high-quality clean reads were assembled into 264,791 unigenes with an average length of 615 bp. A total of 147,865 (55.84%) unigenes were successfully annotated. Differential genes expression analysis indicated that transcriptional regulation was more active in the early stage of apogamy compared to sexual reproduction. Further comparative analysis of the enriched pathways between the early stages of the two reproductive modes demonstrated that starch and sucrose metabolism pathway responsible for cell wall was only significantly enriched in asexual embryonic cell initiation. Furthermore, regulation of plant hormone related genes was more vigorous in apogamy initiation. These findings would be useful for revealing the initiation of apogamy and further understanding of the mechanisms related to asexual reproduction.

Camellia reticulata is the world-famous ornamental flower (Wang et al. 2021). In February 2021, the infected flowers of C. reticulata 'Shizitou' were collected in Zixi Mountain, Chuxiong city, Yunnan province, China (24°9'95″ N, 101°42'53″ E). Flower rot disease incidence ranged from 40% to 75% in the garden. The infected flowers showed symptoms of varying degrees of yellow-browning, dry or wet rot to the whole flower wilted and even dropped (Figure 1A, B, C). Three symptomatic flowers were randomly collected in the garden. Tissues from the infected flowers (cut to 5×5 mm size) were surface-disinfected by 75% ethyl alcohol for 30s, rinsed in sterile water for 3 times to air dry, and cultured in Potato Dextrose Agar medium (PDA) at 25℃±2 in the normal light for 5-7 days (Fang, 1998). Similar fungal colonies were isolated from 50%-75% of the infected flowers. Three isolates from different flowers showed similar colony morphology. After sub-culturing of hyphal tips on PDA for 5-7 days, the initially yellow colored colonies showed abundant white aerial mycelium, with sporulation (Figure 1E, F). The asci (Figure 1G) sporulation site is 24(-37) ×7(-14) μm, and the stalk length is 17-42 μm, with 8 biseriate acuminate ascospores. The mature ascospores (Figure 1H) are olive-brown or brown, lemon-like, double-pointed, with slightly umbilical protrusions at both ends, flat on both sides, 9(-11.5) × 7(-9) × 5.5(-7) μm in size, with germ holes on the top (Wang et al. 2016). These morphological features are consistent with Chaetomium pseudocochliodes. The genomic DNA was extracted from the isolated strains. To identified this fungal pathogen genetically, sequence analyses were conducted using the ITS1/ITS4 (Henson et al. 1993), NL1/NL4 (Liu et al. 2011), EF1-938F /EF1-2218R (Tan et al. 2016) primers for the internal transcribed spacer (ITS), large ribosomal subunit (LSU), and elongation factor 1-α (EF1-α) genes. The obtained sequences were deposited in GenBank with accession numbers MZ817067 (ITS), MZ817072 (LSU), MZ820167 (EF1-α). The phylogenetic trees (Figure 2) were constructed to determine the phylogenetic relationships based on MEGA 6.0 maximum likelihood method. In order to confirm the pathogenicity, the tests were conducted with fungus plug (5 mm) from a 7-day-old colony placed onto the surface of healthy petals. The sterile water-absorbent cottons place onto healthy petal surface near fungus plug and plastic wraps cover in petri dish were used for moisturizing. A total of 3 replicates in each of 3 groups were included (3 healthy petals for a group, 1 for wounded inoculation, 1 for unwounded inoculation, and 1 for sterile PDA plug). A sterile PDA plug was placed onto the surface of healthy petals as a control. After incubation at room temperature for 5 days (Ren. 2019), 3 replicates in each of 2 groups of treated healthy petals for wounded inoculation showed obvious symptoms (Figure 1D), and no symptoms appeared in the control, and healthy petals unwounded showed symptoms for 7-10 days. The fungus was re-isolated from the lesions of inoculated tissues. The re-isolated fungal colonies showed identical morphology and high sequence similarity with ITS, LSU and EF-1α of the initial isolate. No fungus was isolated from the controls. The first extraction of C. pseudocochliodes was also obtained from the roots of the Panax notoginseng in Wenshan, Yunnan (Wang et al. 2016). To our knowledge, this is the first report of flower rot caused by C. pseudocochliodes on C. reticulata in China.