Takuya Ueda

Dr. Takuya Ueda


Research Focus & Metrics

Academic Career Length

44Years (1983-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 August 2001 in Nature Biotechnology
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YSYoshihiro Shimizu
Yoshihiro Shimizu
AIAkio Inoue
Akio Inoue
YTYukihide Tomari
Yukihide Tomari
TSTsutomu Suzuki
Tsutomu Suzuki
TYTakashi Yokogawa
Takashi Yokogawa
TUTakuya Ueda
Takuya Ueda

1 July 2005 in Methods
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Journal Article
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YSYoshihiro Shimizu
Yoshihiro Shimizu
TKTakashi Kanamori
Takashi Kanamori
TUTakuya Ueda
Takuya Ueda

22 March 2019 in Nature Communications
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SBSamuel Berhanu
Samuel Berhanu
TUTakuya Ueda
Takuya Ueda
YKYutetsu Kuruma
Yutetsu Kuruma
Attempts to construct an artificial cell have widened our understanding of living organisms. Many intracellular systems have been reconstructed by assembling molecules, however the mechanism to synthesize its own constituents by self-sufficient energy has to the best of our knowledge not been developed. Here, we combine a cell-free protein synthesis system and small proteoliposomes, which consist of purified ATP synthase and bacteriorhodopsin, inside a giant unilamellar vesicle to synthesize protein by the production of ATP by light. The photo-synthesized ATP is consumed as a substrate for transcription and as an energy for translation, eventually driving the synthesis of bacteriorhodopsin or constituent proteins of ATP synthase, the original essential components of the proteoliposome. The de novo photosynthesized bacteriorhodopsin and the parts of ATP synthase integrate into the artificial photosynthetic organelle and enhance its ATP photosynthetic activity through the positive feedback of the products. Our artificial photosynthetic cell system paves the way to construct an energetically independent artificial cell.

17 March 2009 in Proceedings of the National Academy of Sciences
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TNTatsuya Niwa
Tatsuya Niwa
BEIWEN YINGBEIWEN YING
BEIWEN YING
KSKatsuyo Saito
Katsuyo Saito
WJWenZhen Jin
WenZhen Jin
STShoji Takada
Shoji Takada
HTHideki Taguchi
Hideki Taguchi
Protein folding often competes with intermolecular aggregation, which in most cases irreversibly impairs protein function, as exemplified by the formation of inclusion bodies. Although it has been empirically determined that some proteins tend to aggregate, the relationship between the protein aggregation propensities and the primary sequences remains poorly understood. Here, we individually synthesized the entire ensemble of Escherichia coli proteins by using an in vitro reconstituted translation system and analyzed the aggregation propensities. Because the reconstituted translation system is chaperone-free, we could evaluate the inherent aggregation propensities of thousands of proteins in a translation-coupled manner. A histogram of the solubilities, based on data from 3,173 translated proteins, revealed a clear bimodal distribution, indicating that the aggregation propensities are not evenly distributed across a continuum. Instead, the proteins can be categorized into 2 groups, soluble and aggregation-prone proteins. The aggregation propensity is most prominently correlated with the structural classification of proteins, implying that the prediction of aggregation propensity requires structural information about the protein.

1 February 2000 in Journal of Biological Chemistry
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TYT Yasukawa
T Yasukawa
TSTsutomu Suzuki
Tsutomu Suzuki
TUTakuya Ueda
Takuya Ueda
SOS Ohta
S Ohta
KWK Watanabe
K Watanabe
Glutamine is the preferred precursor for the neurotransmitter pool of glutamate, the major excitatory transmitter in the mammalian central nervous system. We have isolated a complementary DNA clone (designated GlnT) encoding a plasma membrane glutamine transporter from glutamatergic neurons in culture, and its properties have been examined using the T7 vaccinia system in fibroblasts. When GlnT is transfected into CV-1 cells, l-glutamine is the preferred substrate. Transport is Na+-dependent and inhibited by α-methylaminoisobutyric acid, a specific inhibitor of neutral amino acid transport system A. Kinetic analysis of glutamine uptake by GlnT is saturable, with a Michaelis constant (K m) of 489 ± 88 μm at pH 7.4. Glutamine uptake mediated by GlnT is pH-sensitive with a 5-fold greater efficiency of uptake at pH 8.2 than at pH 6.6. Only the maximal velocity of transport increases without a significant change in K m. The distribution of GlnT mRNA and protein in the central nervous system is widespread and is expressed on neurons that use glutamate as their neurotransmitter. In cultured cerebellar granule cells, GlnT is expressed only on neurons and is absent from astrocytes. GlnT expression increases concomitantly with the morphologic and functional differentiation of these cells in vitro, consistent with its role of supplying glutamatergic neurons with their neurotransmitter precursor. GlnT is the first member of the system A family of neutral amino acid transporters with 11 putative membrane-spanning domains and is a potential target to modulate presynaptic glutamatergic function.

1 February 2009 in Biochimica et Biophysica Acta (BBA) - Biomembranes
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Journal Article
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YKYutetsu Kuruma
Yutetsu Kuruma
Pasquale StanoPasquale Stano
Pasquale Stano
TUTakuya Ueda
Takuya Ueda
PLPier Luigi Luisi
Pier Luigi Luisi