Özlem BÜYÜKTANIR YAŞ

Prof. Dr. Özlem BÜYÜKTANIR YAŞ

orcid

Research Focus & Metrics

Academic Career Length

18Years (2009-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 July 2016 in Cell Host & Microbe
Verified
Journal Article
Closed access
ASAlexis A. Smith
Alexis A. Smith
NNNicolas Navasa
Nicolas Navasa
XYXiuli Yang
Xiuli Yang
CWCara N. Wilder
Cara N. Wilder
ÖYÖzlem BÜYÜKTANIR YAŞ
Özlem BÜYÜKTANIR YAŞ
UPUtpal Pal
Utpal Pal

19 June 2015 in PLOS ONE
Verified
Journal Article
Open access
PDF file
BBBrian T. Backstedt
Brian T. Backstedt
ÖYÖzlem BÜYÜKTANIR YAŞ
Özlem BÜYÜKTANIR YAŞ
JLJanet Lindow
Janet Lindow
EWElsio A. Wunder
Elsio A. Wunder
MRMitermayer G. Reis
Mitermayer G. Reis
UPUtpal Pal
Utpal Pal
Pathogenic Leptospira species cause a prevalent yet neglected zoonotic disease with mild to life-threatening complications in a variety of susceptible animals and humans. Diagnosis of leptospirosis, which primarily relies on antiquated serotyping methods, is particularly challenging due to presentation of non-specific symptoms shared by other febrile illnesses, often leading to misdiagnosis. Initiation of antimicrobial therapy during early infection to prevent more serious complications of disseminated infection is often not performed because of a lack of efficient diagnostic tests. Here we report that specific regions of leptospiral 16S ribosomal RNA molecules constitute a novel and efficient diagnostic target for PCR-based detection of pathogenic Leptospira serovars. Our diagnostic test using spiked human blood was at least 100-fold more sensitive than corresponding leptospiral DNA-based quantitative PCR assays, targeting the same 16S nucleotide sequence in the RNA and DNA molecules. The sensitivity and specificity of our RNA assay against laboratory-confirmed human leptospirosis clinical samples were 64% and 100%, respectively, which was superior then an established parallel DNA detection assay. Remarkably, we discovered that 16S transcripts remain appreciably stable ex vivo, including untreated and stored human blood samples, further highlighting their use for clinical detection of L. interrogans. Together, these studies underscore a novel utility of RNA targets, specifically 16S rRNA, for development of PCR-based modalities for diagnosis of human leptospirosis, and also may serve as paradigm for detection of additional bacterial pathogens for which early diagnosis is warranted.

7 January 2016 in The Journal of Infectious Diseases
Verified
Journal Article
Open access
PDF file
FKFaith Kung
Faith Kung
SKSimarjot Kaur
Simarjot Kaur
ASAlexis A. Smith
Alexis A. Smith
XYXiuli Yang
Xiuli Yang
CWCara N. Wilder
Cara N. Wilder
UPUtpal Pal
Utpal Pal
Borrelia burgdorferi harbors a limited set of transmembrane surface proteins, most of which constitute key targets of humoral immune responses. Here we show that BB0405, a conserved membrane-spanning protein of unknown function, fails to evoke detectable antibody responses despite its extracellular exposure. bb0405 is a member of an operon and ubiquitously expressed throughout the rodent-tick infection cycle. The gene product serves an essential function in vivo, as bb0405-deletion mutants are unable to transmit from ticks and establish infection in mammalian hosts. Despite the lack of BB0405-specific immunoglobulin M or immunoglobulin G antibodies during natural infection, mice immunized with a recombinant version of the protein elicited high-titer and remarkably long-lasting antibody responses, conferring significant host protection against tick-borne infection. Taken together, these studies highlight the essential role of an apparently immune-invisible borrelial transmembrane protein in facilitating infection and its usefulness as a target of protective host immunity blocking the transmission of B. burgdorferi.

1 August 2016 in Infection and Immunity
Verified
Journal Article
Closed access
PDF file
MYMeiping Ye
Meiping Ye
KSKavita Sharma
Kavita Sharma
MTMeghna Thakur
Meghna Thakur
ASAlexis A. Smith
Alexis A. Smith
ÖYÖzlem BÜYÜKTANIR YAŞ
Özlem BÜYÜKTANIR YAŞ
UPUtpal Pal
Utpal Pal
The high temperature requirement protease A (HtrA) represents a family of serine proteases that play important roles in microbial biology. Unlike most organisms, Borrelia burgdorferi genome notably encodes for a single HtrA gene-product, termed as BbHtrA. Previous studies identified a few substrates of BbHtrA, however, their physiological relevance could not be ascertained, as targeted deletion of the gene has not been successful. Here we show that BbHtrA transcripts are induced during spirochete growth either at stationary phase or at elevated temperature. Successful generation of BbHtrA deletion mutant and the restoration by genetic complementation suggests a nonessential role of this protease in microbial viability, however, their remarkable growth, morphological, and structural defects during cultivation at 37°C confirms a high temperature requirement for protease activation and function. The BbHtrA-deficient spirochetes were unable to establish infection in mice, as evidenced by assessment of culture, PCR and serology. We show that transcript abundance as well as proteolytic processing of a borrelial protein required for cell fission and infectivity, BB0323, is impaired in BbHtrA mutants grown at 37°C, which likely contributed to their loss of survival in the mammalian host. Together, these results demonstrated the physiological relevance of a unique temperature-regulated borrelial protease, BbHtrA, which further enlightens our knowledge of intriguing aspects of spirochete biology and infectivity.

19 August 2014 in The Journal of Infectious Diseases
Verified
Journal Article
Closed access
TKToru Kariu
Toru Kariu
KSKavita Sharma
Kavita Sharma
PSPreeti Singh
Preeti Singh
ASAlexis A. Smith
Alexis A. Smith
BBBrian Backstedt
Brian Backstedt
UPUtpal Pal
Utpal Pal
We have shown that Borrelia burgdorferi gene product BB0323 is essential for cell fission and pathogen persistence in vivo. Here we describe characterization of a conserved hypothetical protein annotated as BB0238, which specifically interacts with the N-terminal region of BB0323. We show that BB0238 is a subsurface protein, and similar to BB0323, exists in the periplasm and as a membrane-bound protein. Deletion of bb0238 in infectious B. burgdorferi did not affect microbial growth in vitro or survival in ticks, but the mutant was unable to persist in mice or transmit from ticks--defects that are restored on genetic complementation. Remarkably, BB0238 and BB0323 contribute to mutual posttranslational stability, because deletion of one causes dramatic reduction in the protein level of the other partner. Interference with the function of BB0238 or BB0323 and their interaction may provide novel strategies to combat B. burgdorferi infection.

6 August 2015 in Cellular Microbiology
Verified
Journal Article
Open access
PDF file
XYXiuli Yang
Xiuli Yang
YLYi-Pin Lin
Yi-Pin Lin
RHRyan D. Heselpoth
Ryan D. Heselpoth
ÖYÖzlem BÜYÜKTANIR YAŞ
Özlem BÜYÜKTANIR YAŞ
JQJinhong Qin
Jinhong Qin
UPUtpal Pal
Utpal Pal
Borrelia burgdorferi surface‐located membrane protein 1, also known as Lmp1, has been shown to play critical roles in pathogen evasion of host‐acquired immune defences, thereby facilitating persistent infection. Lmp1 possesses three regions representing potentially discrete domains: Lmp1N, Lmp1M and Lmp1C. Because of its insignificant homology to known proteins, how Lmp1 or its specific regions contribute to microbial biology and infection remains enigmatic. Here, we show that distinct from Lmp1N and Lmp1C, Lmp1M is composed of at least 70% alpha helices and completely lacks recognizable beta sheets. The region binds to host glycosaminoglycan chondroitin‐6‐sulfate molecules and facilitates mammalian cell attachment, suggesting an adhesin function of Lmp1M. Phenotypic analysis of the Lmp1‐deficient mutant engineered to produce Lmp1M on the microbial surface suggests that Lmp1M can independently support B. burgdorferi infectivity in murine hosts. Further exploration of functions of Lmp1 distinct regions will shed new light on the intriguing biology and infectivity of spirochetes and help develop novel interventions to combat Lyme disease.