Xiaobo Liu

Prof. Dr. Xiaobo Liu

Nanjing University of Science and Technology, Nanjing, Jiangsu, China
orcid

Research Focus & Metrics

Academic Career Length

15Years (2012-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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14 September 2020 in Nature Sustainability
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Journal Article
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Xiaobo LiuXiaobo Liu
Xiaobo Liu
RKRobert J. Koestler
Robert J. Koestler
TWThomas Warscheid
Thomas Warscheid
YKYoko Katayama
Yoko Katayama
JGJi-Dong Gu
Ji-Dong Gu

8 June 2018 in Microbiome
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Journal Article
Open access
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Xiaobo LiuXiaobo Liu
Xiaobo Liu
Meng LIMeng LI
Meng LI
CCCindy J. Castelle
Cindy J. Castelle
APAlexander J. Probst
Alexander J. Probst
ZZZhichao Zhou
Zhichao Zhou
JGJi-Dong Gu
Ji-Dong Gu
As a recently discovered member of the DPANN superphylum, Woesearchaeota account for a wide diversity of 16S rRNA gene sequences, but their ecology, evolution, and metabolism remain largely unknown. Here, we assembled 133 global clone libraries/studies and 19 publicly available genomes to profile these patterns for Woesearchaeota. Phylogenetic analysis shows a high diversity with 26 proposed subgroups for this recently discovered archaeal phylum, which are widely distributed in different biotopes but primarily in inland anoxic environments. Ecological patterns analysis and ancestor state reconstruction for specific subgroups reveal that oxic status of the environments is the key factor driving the distribution and evolutionary diversity of Woesearchaeota. A selective distribution to different biotopes and an adaptive colonization from anoxic to oxic environments can be proposed and supported by evidence of the presence of ferredoxin-dependent pathways in the genomes only from anoxic biotopes but not from oxic biotopes. Metabolic reconstructions support an anaerobic heterotrophic lifestyle with conspicuous metabolic deficiencies, suggesting the requirement for metabolic complementarity with other microbes. Both lineage abundance distribution and co-occurrence network analyses across diverse biotopes confirmed metabolic complementation and revealed a potential syntrophic relationship between Woesearchaeota and methanogens, which is supported by metabolic modeling. If correct, Woesearchaeota may impact methanogenesis in inland ecosystems. The findings provide an ecological and evolutionary framework for Woesearchaeota at a global scale and indicate their potential ecological roles, especially in methanogenesis.

1 November 2018 in Biotechnology Advances
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Journal Article
Closed access
Xiaobo LiuXiaobo Liu
Xiaobo Liu
LSLiang Shi
Liang Shi
JGJi-Dong Gu
Ji-Dong Gu

1 September 2018 in International Biodeterioration & Biodegradation
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Journal Article
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Xiaobo LiuXiaobo Liu
Xiaobo Liu
HMHan Meng
Han Meng
YWYali Wang
Yali Wang
YKYoko Katayama
Yoko Katayama
JGJi-Dong Gu
Ji-Dong Gu

31 January 2022 in Biotechnology Advances
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Journal Article
Closed access
Xiaobo LiuXiaobo Liu
Xiaobo Liu
BCBin Cao
Bin Cao
LYLiang Yang
Liang Yang
JGJi-Dong Gu
Ji-Dong Gu

22 June 2022 in Trends in Microbiology
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Journal Article
Closed access
Xiaobo LiuXiaobo Liu
Xiaobo Liu
YQYoufen Qian
Youfen Qian
FWFasi Wu
Fasi Wu
YWYali Wang
Yali Wang
WWWanfu Wang
Wanfu Wang
JGJi-Dong Gu
Ji-Dong Gu