In vitro fertilization (IVF) often requires multiple cycles before successful implantation and live birth are achieved. Although embryo quality and technical factors have traditionally been emphasized, emerging evidence suggests that parental microbiome composition and nutritional status are important, but under-recognized, determinants of reproductive success. Dysbiosis of the vaginal and endometrial microbiota in women is associated with reduced implantation rates, chronic low-grade inflammation, and altered endometrial receptivity, while maternal gut microbiota imbalance may contribute to systemic metabolic inflammation, oxidative stress, and epigenetic modifications affecting early embryonic development. Paternal factors are increasingly rec-ognized as equally important, as altered gut microbiota, obesity, insulin resistance, and micronu-trient deficiencies may affect sperm DNA integrity, methylation patterns, and small noncoding RNA profiles, potentially influencing embryonic developmental programming. This review aims to evaluate the interconnected mechanisms linking parental microbiome composition, nutritional and metabolic status, inflammation, oxidative stress, and epigenetic regulation with assisted reproduction and recurrent IVF failure. A comprehensive literature search was performed using PubMed/MEDLINE, Scopus, and Web of Science, covering the period from 2000 to 2025, with predefined keywords and Medical Subject Headings related to in vitro fertilization, recurrent implantation failure, maternal gut microbiome, reproductive tract dysbiosis, paternal gut-testis axis, oxidative stress, sperm epigenetics, DNA methylation, short-chain fatty acids, and preconception nutritional optimization. We considered peer-reviewed articles published in English, including original research, meta-analyses, and high-impact reviews providing mechanistic and translational insights. The evidence indicates that parental dysbiosis and nutritional and metabolic im-balances may converge on inflammatory, oxidative, mitochondrial, and epigenetic pathways, creating a biological environment that compromises implantation and may influence early em-bryonic programming. Importantly, these potentially modifiable factors support preconception microbiome modulation, nutritional optimization, and metabolic conditioning for both partners before IVF. In conclusion, an integrated preconception approach addressing parental microbiome, nutritional, metabolic, inflammatory, and epigenetic factors may represent a promising strategy for improving reproductive outcomes and potentially supporting the long-term health of the offspring.