Burcu Gumuscu

Dr. Burcu Gumuscu

Department of Biomedical Engineering, Eindhoven University of Technology, 5600 MB Eindhoven, The Netherlands
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Research Focus & Metrics

Academic Career Length

16Years (2011-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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28 July 2022 in Micromachines
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Journal Article
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JKJihoon Ko
Jihoon Ko
DPDohyun Park
Dohyun Park
SLSomin Lee
Somin Lee
Burcu GumuscuBurcu Gumuscu
Burcu Gumuscu
NJNoo Li Jeon
Noo Li Jeon
We guide the use of organ-on-chip technology in tissue engineering applications. Organ-on-chip technology is a form of microengineered cell culture platform that elaborates the in-vivo like organ or tissue microenvironments. The organ-on-chip platform consists of microfluidic channels, cell culture chambers, and stimulus sources that emulate the in-vivo microenvironment. These platforms are typically engraved into an oxygen-permeable transparent material. Fabrication of these materials requires the use of microfabrication strategies, including soft lithography, 3D printing, and injection molding. Here we provide an overview of what is an organ-on-chip platform, where it can be used, what it is composed of, how it can be fabricated, and how it can be operated. In connection with this topic, we also introduce an overview of the recent applications, where different organs are modeled on the microscale using this technology.

1 November 2013 in International Biodeterioration & Biodegradation
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Journal Article
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Burcu GumuscuBurcu Gumuscu
Burcu Gumuscu
TTTurgay Tekinay
Turgay Tekinay

28 October 2016 in Advanced Functional Materials
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Burcu GumuscuBurcu Gumuscu
Burcu Gumuscu
AHA. Sander Haase
A. Sander Haase
ABAnne M. Benneker
Anne M. Benneker
MHMark A. Hempenius
Mark A. Hempenius
ABAlbert van Den Berg
Albert van Den Berg
JEJan C. T. Eijkel
Jan C. T. Eijkel

13 June 2017 in Scientific Reports
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Burcu GumuscuBurcu Gumuscu
Burcu Gumuscu
HAHugo J. Albers
Hugo J. Albers
ABAlbert van Den Berg
Albert van Den Berg
JEJan C. T. Eijkel
Jan C. T. Eijkel
AMAndries van der Meer
Andries van der Meer
We demonstrate an in vitro microfluidic cell culture platform that consists of periodic 3D hydrogel compartments with controllable shapes. The microchip is composed of approximately 500 discontinuous collagen gel compartments locally patterned in between PDMS pillars, separated by microfluidic channels. The typical volume of each compartment is 7.5 nanoliters. The compartmentalized design of the microchip and continuous fluid delivery enable long-term culturing of Caco-2 human intestine cells. We found that the cells started to spontaneously grow into 3D folds on day 3 of the culture. On day 8, Caco-2 cells were co-cultured for 36 hours under microfluidic perfusion with intestinal bacteria (E. coli) which did not overgrow in the system, and adhered to the Caco-2 cells without affecting cell viability. Continuous perfusion enabled the preliminary evaluation of drug effects by treating the co-culture of Caco-2 and E. coli with 34 µg ml−1 chloramphenicol during 36 hours, resulting in the death of the bacteria. Caco-2 cells were also cultured in different compartment geometries with large and small hydrogel interfaces, leading to differences in proliferation and cell spreading profile of Caco-2 cells. The presented approach of compartmentalized cell culture with facile microfluidic control can substantially increase the throughput of in vitro drug screening in the future.

4 December 2014 in Lab on a Chip
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Burcu GumuscuBurcu Gumuscu
Burcu Gumuscu
JBJohan G. Bomer
Johan G. Bomer
ABAlbert van Den Berg
Albert van Den Berg
JEJan C. T. Eijkel
Jan C. T. Eijkel
Capillary barriers provide a simple and elegant means of autonomous fluid-flow control in microfluidic systems.

3 March 2023 in Biosensors
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Daan Corniel 't HartDaan Corniel 't Hart
Daan Corniel 't Hart
DYDilemin Yildiz
Dilemin Yildiz
VPValentina Palacio-Castañeda
Valentina Palacio-Castañeda
LLLanhui Li
Lanhui Li
Burcu GumuscuBurcu Gumuscu
Burcu Gumuscu
TNTom Nijenhuis
Tom Nijenhuis
Crosstalk between glomerular endothelial cells and glomerular epithelial cells (podocytes) is increasingly becoming apparent as a crucial mechanism to maintain the integrity of the glomerular filtration barrier. However, in vitro studies directly investigating the effect of this crosstalk on the glomerular filtration barrier are scarce because of the lack of suitable experimental models. Therefore, we developed a custom-made glomerulus-on-a-chip model recapitulating the glomerular filtration barrier, in which we investigated the effects of co-culture of glomerular endothelial cells and podocytes on filtration barrier function and the phenotype of these respective cell types. The custom-made glomerulus-on-a-chip model was designed using soft lithography. The chip consisted of two parallel microfluidic channels separated by a semi-permeable polycarbonate membrane. The glycocalyx was visualized by wheat germ agglutinin staining and the barrier integrity of the glomerulus-on-a-chip model was determined by measuring the transport rate of fluorescently labelled dextran from the top to the bottom channel. The effect of crosstalk on the transcriptome of glomerular endothelial cells and podocytes was investigated via RNA-sequencing. Glomerular endothelial cells and podocytes were successfully cultured on opposite sides of the membrane in our glomerulus-on-a-chip model using a polydopamine and collagen A double coating. Barrier integrity of the chip model was significantly improved when glomerular endothelial cells were co-cultured with podocytes compared to monocultures of either glomerular endothelial cells or podocytes. Co-culture enlarged the surface area of podocyte foot processes and increased the thickness of the glycocalyx. RNA-sequencing analysis revealed the regulation of cellular pathways involved in cellular differentiation and cellular adhesion as a result of the interaction between glomerular endothelial cells and podocytes. We present a novel custom-made glomerulus-on-a-chip co-culture model and demonstrated for the first time using a glomerulus-on-a-chip model that co-culture affects the morphology and transcriptional phenotype of glomerular endothelial cells and podocytes. Moreover, we showed that co-culture improves barrier function as a relevant functional readout for clinical translation. This model can be used in future studies to investigate specific glomerular paracrine pathways and unravel the role of glomerular crosstalk in glomerular (patho) physiology.