Yelyzaveta Meleshko, Professor, Doctor in Technics (Doctor of Technic Sciences), Central Ukraіnian National Technical University, Kropyvnytskyi, Ukraine, e-mail: elismeleshko@gmail.com, ORCID ID: 0000-0001-8791-0063 Mykola Yakymenko, Associate Professor, PhD in TPhysical and Mathematicals (Candidate of Physical and Mathematical Sciences), Central Ukraіnian National Technical University, Kropyvnytskyi, Ukraine, e-mail: m.yakymenko@gmail.com, ORCID ID: 0000-0003-3290-6088 Volodymyr Mikhav, Doctor of Philosophy, Central Ukraіnian National Technical University, Kropyvnytskyi, Ukraine, e-mail: mihaw.wolodymyr@gmail.com, ORCID ID: 0000-0003-4816-4680 Yaroslav Shulika, post-graduate, Central Ukraіnian National Technical University, Kropyvnytskyi, Ukraine, e-mail: yar.shulika@gmail.com, ORCID ID: 0000-0002-6713-7269 The object of the research is the process of detecting anomalies in high-load complex computer systems (HLCSS). The practical application area includes HLCSS such as banking transaction servers and cloud platforms, where stable operation must be ensured under heavy request loads. The problem addressed in the research is the lack of real-time anomaly detection models in HLCSS with a specified accuracy under resource constraints. Anomalies may signal system malfunctions, process mismatches, or potential cyberattacks. High-load systems are particularly sensitive to even minor disruptions, as they can cause significant delays or complete service unavailability for many users simultaneously, leading to financial losses and loss of customer trust. Modern web services face issues such as attempts of DDoS attacks, significant fluctuations in user requests, database connection problems, memory leaks, and the impact of unexpected changes in network or hardware configuration. Therefore, ensuring timely anomaly detection is a critical aspect of high-load system security. Automating the analysis process and promptly identifying potential problems in real time help reduce risks and minimize downtime. Developing a mathematical model for anomaly detection in high-load web services aims not only to improve detection accuracy but also to ensure a timely response to potential threats under resource constraints. This helps avoid significant financial losses and enhances user trust in such services. The paper creates and investigates a mathematical model for detecting anomalous connections between components of a complex computer system (HLCSS). The testing results of the model showed the following performance metrics: accuracy – 84%, precision – 87%, recall – 74%, F1-Score – 78%. The positive results of the study are explained by the following prerequisites: the HLCSS model uses projection matrices and orthogonal vector functions for anomaly analysis. This allows for the creation of spatial decompositions that reveal complex interconnections between components of a complex computer system using only eigenvalues and vectors. Thus, the model can be applied for operational data analysis and anomaly detection in resource-constrained environments.