Height, diameter, and survival data were obtained from 16 rangewide jack pine provenance trials in eastern Canada and the United States. Climate data for each seed source and test location were used to relate height growth to 72 climate variables. Population response functions based on August minimum and January maximum temperatures were developed to predict climate values maximizing height growth for individual seed sources. Site transfer functions based on March precipitation and December minimum temperature were developed to predict climate values maximizing height growth for test locations. Contour lines representing optimal performance were fitted to current (1971–2000) and future (2041–2070) climate grids. Optimal growth is currently achieved between 46°N and 47°N latitude for most seed sources. Future temperature increases are expected to cause a northward shift of the optimal habitat by approximately 2°. Northern sources are growing at temperatures below optimum and would benefit from warmer environments provided other environmental factors do not become limiting. Central sources are growing at close to optimum and will be negatively affected by increased temperatures in the future. Southern sources performed better in cooler environments, and warmer temperatures may cause significant height growth loss and the potential extirpation of these populations.
1 January 2009 in Canadian Journal of Forest Research
Height, diameter, and survival data were obtained from 20 range-wide black spruce ( Picea mariana (Mill.) BSP) provenance trials established from 1973 to 1977. Population response functions based on February minimum temperatures were developed for 23 Ontario and Great Lakes states provenances to predict climate values maximizing height growth for individual seed sources. Site transfer functions based on February maximum temperatures and May maximum temperatures were developed for five test sites to predict climate values maximizing height growth for test locations. Contour lines representing optimal performance were fitted to current (1961–1990) and future (2041–2070) climate grids. For black spruce seed sources from the east of Lake Superior and Lake Huron, optimal height growth was achieved between 45° and 47°N; for the western sources optimal performance moved north between 46° and 48°N. In eastern Ontario, height growth of northern sources may increase with transfer to warmer environments and with future temperature increases. Central sources are currently growing at or close to optimum and will be negatively affected by increased future temperatures. Southern sources may currently benefit from transfer to cooler environments, and the effects of global warming may cause significant height growth loss and the potential extirpation of local populations.
Premise of the Study: The tropical tree family Lecythidaceae has enormous ecological and economic importance in the Amazon basin. Lecythidaceae species can be difficult to identify without molecular data, however, and phylogenetic relationships within and among the most diverse genera are poorly resolved.Methods: To develop informative genetic markers for Lecythidaceae, we used genome skimming to de novo assemble the full plastome of the Brazil nut tree (Bertholletia excelsa) and 23 other Lecythidaceae species. Indices of nucleotide diversity and phylogenetic signal were used to identify regions suitable for genetic marker development.Results: The B. excelsa plastome contained 160,472 bp and was arranged in a quadripartite structure. Using the 24 plastome alignments, we developed primers for 10 coding and non‐coding DNA regions containing exceptional nucleotide diversity and phylogenetic signal. We also developed 19 chloroplast simple sequence repeats for population‐level studies.Discussion: The coding region ycf1 and the spacer rpl16‐rps3 outperformed plastid DNA markers previously used for barcoding and phylogenetics. Used in a phylogenetic analysis, the matrix of 24 plastomes showed with 100% bootstrap support that Lecythis and Eschweilera are polyphyletic. The plastomes and primers presented in this study will facilitate a broad array of ecological and evolutionary studies in Lecythidaceae.
Black spruce (Picea mariana [Mill.] B.S.P.) is a dominant conifer species in the North American boreal forest that plays important ecological and economic roles. Here, we present the first genome assembly of P. mariana with a reconstructed genome size of 18.3 Gbp and NG50 scaffold length of 36.0 kbp. A total of 66,332 protein-coding sequences were predicted in silico and annotated based on sequence homology. We analyzed the evolutionary relationships between P. mariana and 5 other spruces for which complete nuclear and organelle genome sequences were available. The phylogenetic tree estimated from mitochondrial genome sequences agrees with biogeography; specifically, P. mariana was strongly supported as a sister lineage to P. glauca and 3 other taxa found in western North America, followed by the European Picea abies. We obtained mixed topologies with weaker statistical support in phylogenetic trees estimated from nuclear and chloroplast genome sequences, indicative of ancient reticulate evolution affecting these 2 genomes. Clustering of protein-coding sequences from the 6 Picea taxa and 2 Pinus species resulted in 34,776 orthogroups, 560 of which appeared to be specific to P. mariana. Analysis of these specific orthogroups and dN/dS analysis of positive selection signatures for 497 single-copy orthogroups identified gene functions mostly related to plant development and stress response. The P. mariana genome assembly and annotation provides a valuable resource for forest genetics research and applications in this broadly distributed species, especially in relation to climate adaptation.