Dario Bonanomi

Dr. Dario Bonanomi


Research Focus & Metrics

Academic Career Length

24Years (2003-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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13 June 2012 in Nature
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Journal Article
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TMTodd S. Macfarlan
Todd S. Macfarlan
WGWesley D. Gifford
Wesley D. Gifford
SDShawn Driscoll
Shawn Driscoll
KLKaren Lettieri
Karen Lettieri
Helen Mary RoweHelen Mary Rowe
Helen Mary Rowe
SPSamuel L. Pfaff
Samuel L. Pfaff
Embryonic stem (ES) cells are derived from blastocyst-stage embryos and are thought to be functionally equivalent to the inner cell mass, which lacks the ability to produce all extraembryonic tissues. Here we identify a rare transient cell population within mouse ES and induced pluripotent stem (iPS) cell cultures that expresses high levels of transcripts found in two-cell (2C) embryos in which the blastomeres are totipotent. We genetically tagged these 2C-like ES cells and show that they lack the inner cell mass pluripotency proteins Oct4 (also known as Pou5f1), Sox2 and Nanog, and have acquired the ability to contribute to both embryonic and extraembryonic tissues. We show that nearly all ES cells cycle in and out of this privileged state, which is partially controlled by histone-modifying enzymes. Transcriptome sequencing and bioinformatic analyses showed that many 2C transcripts are initiated from long terminal repeats derived from endogenous retroviruses, suggesting this foreign sequence has helped to drive cell-fate regulation in placental mammals.

26 March 2004 in BioEssays
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Journal Article
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Flavia ValtortaFlavia Valtorta
Flavia Valtorta
Maria PennutoMaria Pennuto
Maria Pennuto
DBDario Bonanomi
Dario Bonanomi
FBFabio Benfenati
Fabio Benfenati

1 February 2012 in Cell
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Journal Article
Closed access
DBDario Bonanomi
Dario Bonanomi
OCOnanong Chivatakarn
Onanong Chivatakarn
GBGe Bai
Ge Bai
HAHouari Abdesselem
Houari Abdesselem
KLKaren Lettieri
Karen Lettieri
SPSamuel L. Pfaff
Samuel L. Pfaff

15 October 2008 in The Journal of Neuroscience
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Journal Article
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GCGaia Colasante
Gaia Colasante
PCPatrick Collombat
Patrick Collombat
VRValentina Raimondi
Valentina Raimondi
DBDario Bonanomi
Dario Bonanomi
Carmelo FerraiCarmelo Ferrai
Carmelo Ferrai
VBVania Broccoli
Vania Broccoli
The Arx transcription factor is expressed in the developing ventral telencephalon and subsets of its derivatives. Mutation of human ARX ortholog causes neurological disorders including epilepsy, lissencephaly, and mental retardation. We have isolated the mouseArxendogenous enhancer modules that control its tightly compartmentalized forebrain expression. Interestingly, they are scattered downstream of its coding region and partially included within the introns of the downstreamPolA1gene. These enhancers are ultraconserved noncoding sequences that are highly conserved throughout the vertebrate phylum. Functional characterization of theArxGABAergic enhancer element revealed its strict dependence on the activity of Dlx transcription factors.Dlxoverexpression induces ectopic expression of endogenous Arx and its isolated enhancer, whereas loss ofDlxexpression results in reducedArxexpression, suggesting that Arx is a key mediator of Dlx function. To further elucidate the mechanisms involved, a combination of gain-of-function studies in mutantArxorDlxtissues was pursued. This analysis provided evidence that, although Arx is necessary for the Dlx-dependent promotion of interneuron migration, it is not required for the GABAergic cell fate commitment mediated by Dlx factors. Although Arx has additional functions independent of the Dlx pathway, we have established a direct genetic relationship that controls critical steps in the development of telencephalic GABAergic neurons. These findings contribute elucidating the genetic hierarchy that likely underlies the etiology of a variety of human neurodevelopmental disorders.

18 December 2015 in Science
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Journal Article
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NANeal D. Amin
Neal D. Amin
GBGe Bai
Ge Bai
JKJason R. Klug
Jason R. Klug
DBDario Bonanomi
Dario Bonanomi
MPMatthew T. Pankratz
Matthew T. Pankratz
SPSamuel L. Pfaff
Samuel L. Pfaff
The makings of motor neuron disease: Developing motor neurons link the muscles to the central nervous system. Amin et al. found that microRNA-218 (miR-218) was expressed in developing motor neurons and repressed a wide network of genes whose expression typifies other sorts of neurons. Mice lacking miR-218 died at birth with symptoms characteristic of human motor neuron diseases. Science , this issue p. 1525

8 November 2006 in The Journal of Neuroscience
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Journal Article
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AMAndrea Menegon
Andrea Menegon
DBDario Bonanomi
Dario Bonanomi
CAChiara Albertinazzi
Chiara Albertinazzi
FLFrancesco Lotti
Francesco Lotti
GFGiuliana Ferrari
Giuliana Ferrari
Flavia ValtortaFlavia Valtorta
Flavia Valtorta
Protein kinase A (PKA) modulates several steps of synaptic transmission. However, the identification of the mediators of these effects is as yet incomplete. Synapsins are synaptic vesicle (SV)-associated phosphoproteins that represent the major presynaptic targets of PKA. We show that, in hippocampal neurons, cAMP-dependent pathways affect SV exocytosis and that this effect is primarily brought about through synapsin I phosphorylation. Phosphorylation by PKA, by promoting dissociation of synapsin I from SVs, enhances the rate of SV exocytosis on stimulation. This effect becomes relevant when neurons are challenged with sustained stimulation, because it appears to counteract synaptic depression and accelerate recovery from depression by fostering the supply of SVs from the reserve pool to the readily releasable pool. In contrast, synapsin phosphorylation appears to be dispensable for the effects of cAMP on the frequency and amplitude of spontaneous synaptic currents and on the amplitude of evoked synaptic currents. The modulation of depolarization-evoked SV exocytosis by PKA phosphorylation of synapsin I is primarily caused by calmodulin (CaM)-dependent activation of cAMP pathways rather than by direct activation of CaM kinases. These data define a hierarchical crosstalk between cAMP- and CaM-dependent cascades and point to synapsin as a major effector of PKA in the modulation of activity-dependent SV exocytosis.