Sarah J MacEachern

Dr. Sarah J MacEachern

orcid

Research Focus & Metrics

Academic Career Length

11Years (2016-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 April 2021 in Genome
Verified
Journal Article
Closed access
SMSarah J MacEachern
Sarah J MacEachern
NFNils Daniel Forkert
Nils Daniel Forkert
Precision medicine is an emerging approach to clinical research and patient care that focuses on understanding and treating disease by integrating multi-modal or multi-omics data from an individual to make patient-tailored decisions. With the large and complex datasets generated using precision medicine diagnostic approaches, novel techniques to process and understand these complex data were needed. At the same time, computer science has progressed rapidly to develop techniques that enable the storage, processing, and analysis of these complex datasets, a feat that traditional statistics and early computing technologies could not accomplish. Machine learning, a branch of artificial intelligence, is a computer science methodology that aims to identify complex patterns in data that can be used to make predictions or classifications on new unseen data or for advanced exploratory data analysis. Machine learning analysis of precision medicine’s multi-modal data allows for broad analysis of large datasets and ultimately a greater understanding of human health and disease. This review focuses on machine learning utilization for precision medicine’s “big data”, in the context of genetics, genomics, and beyond.

19 July 2021 in International Journal of Disability, Development and Education
Verified
Journal Article
Closed access
SMSarah J MacEachern
Sarah J MacEachern
NFNils Daniel Forkert
Nils Daniel Forkert
JLJean-Francois Lemay
Jean-Francois Lemay
DDDeborah Dewey
Deborah Dewey
Children and adolescents with disabilities benefit from physical activity. However, this population has lower fitness levels and higher rates of obesity than their peers, suggesting that they are not meeting physical activity guidelines and are experiencing barriers to participation. The purpose of this study was to quantify physical activity participation and barriers experienced by children and adolescents with disabilities in our area. Forty-five parents or caregivers of children aged 2‒18 with physical and/or intellectual disabilities completed a questionnaire regarding physical activity participation in an average week and barriers to participation, prior to the SARS-CoV-2 pandemic. Data were analysed using quantitative and qualitative methodologies. Ninety-one percent (41/45) of the children and adolescents with disabilities did not participate in sufficient physical activity to meet physical activity guidelines irrespective of type and severity of the disability (p > 0.05). Physical activity participation decreased with increasing age (r = −0.478, p = 0.001). The most commonly identified barrier was ‘environments and programmes not able to handle nature of disability.’ In our sample, the majority of children and adolescents with disabilities did not meet physical activity guidelines, with access reported as a primary barrier. This may have negative consequences on the physical and mental health of children and adolescents with disabilities. The SARS-CoV-2 pandemic may have worsened the rates of physical activity participation noted in our study.

22 March 2016 in Scientific Reports
Verified
Journal Article
Open access
RMRachel Morris
Rachel Morris
AFAidan Fagan-Murphy
Aidan Fagan-Murphy
SMSarah J MacEachern
Sarah J MacEachern
DCDerek Covill
Derek Covill
BPBhavik Patel
Bhavik Patel
Various investigations have focused on understanding the relationship between mucosal serotonin (5-HT) and colonic motility, however contradictory studies have questioned the importance of this intestinal transmitter. Here we described the fabrication and use of a fecal pellet electrochemical sensor that can be used to simultaneously detect the release of luminal 5-HT and colonic motility. Fecal pellet sensor devices were fabricated using carbon nanotube composite electrodes that were housed in 3D printed components in order to generate a device that had shape and size that mimicked a natural fecal pellet. Devices were fabricated where varying regions of the pellet contained the electrode. Devices showed that they were stable and sensitive forex vivodetection of 5-HT and no differences in the fecal pellet velocity was observed when compared to natural fecal pellets. The onset of mucosal 5-HT was observed prior to the movement of the fecal pellet. The release of mucosal 5-HT occurred oral to the fecal pellet and was linked to the contraction of the bowel wall that drove pellet propulsion. Taken, together these findings provide new insights into the role of mucosal 5-HT and suggest that the transmitter acts as a key initiator of fecal pellet propulsion.

15 March 2018 in American Journal of Neuroradiology
Verified
Journal Article
Open access
PDF file
JSJonathan Santoro
Jonathan Santoro
NFNils Daniel Forkert
Nils Daniel Forkert
QYQ.-Z. Yang
Q.-Z. Yang
SPS. Pavitt
S. Pavitt
SMSarah J MacEachern
Sarah J MacEachern
KYK.W. Yeom
K.W. Yeom
BACKGROUND AND PURPOSE: Tension-type and migraine-type headaches are the most common chronic paroxysmal disorders of childhood. The goal of this study was to compare regional cerebral volumes and diffusion in tension-type and migraine-type headaches against published controls. MATERIALS AND METHODS: Patients evaluated for tension-type or migraine-type headache without aura from May 2014 to July 2016 in a single center were retrospectively reviewed. Thirty-two patients with tension-type headache and 23 with migraine-type headache at an average of 4 months after diagnosis were enrolled. All patients underwent DWI at 3T before the start of pharmacotherapy. Using atlas-based DWI analysis, we determined regional volumetric and diffusion properties in the cerebral cortex, thalamus, caudate, putamen, globus pallidus, hippocampus, amygdala, nucleus accumbens, brain stem, and cerebral white matter. Multivariate analysis of covariance was used to test for differences between controls and patients with tension-type and migraine-type headaches. RESULTS: There were no significant differences in regional brain volumes between the groups. Patients with tension-type and migraine-type headaches showed significantly increased ADC in the hippocampus and brain stem compared with controls. Additionally, only patients with migraine-type headache showed significantly increased ADC in the thalamus and a trend toward increased ADC in the amygdala compared with controls. CONCLUSIONS: This study identifies early cerebral diffusion changes in patients with tension-type and migraine-type headaches compared with controls. The hypothesized mechanisms of nociception in migraine-type and tension-type headaches may explain the findings as a precursor to structural changes seen in adult patients with chronic headache.

22 March 2024 in Paediatrics & Child Health
Verified
Journal Article
Open access
MRMeagan A Roy
Meagan A Roy
CKCeilidh Kinlin
Ceilidh Kinlin
MEMyka Estes
Myka Estes
SMSarah J MacEachern
Sarah J MacEachern
Emergency department (ED) visits for children with autism can present challenges due to the unique sensory needs of this population. This Quality Improvement (QI) project executed two Plan-Do-Study-Act (PDSA) cycles to create and implement a Sensory Toolkit in the ED for children with autism. Most caregivers (94%; n = 31/33) and healthcare providers (HCPs; 86%; n = 37/44) identified the need for sensory items in the ED. In PDSA Cycle 1, 100% of caregivers (n = 21) and HCPs (n = 3) agreed/strongly agreed that the ED Sensory Toolkit was helpful. In PDSA Cycle 2, 92% of caregivers (n = 12/13) and 100% of HCPs (n = 3) agreed/strongly agreed that they were helpful. The Sensory Toolkit was positively evaluated by caregivers of children with autism and HCPs during the child’s visit to the ED. There is an opportunity to adapt the Sensory Toolkit for other EDs and areas of the hospital.

24 May 2023 in Frontiers in Pediatrics
Verified
Journal Article
Open access
SMSarah J MacEachern
Sarah J MacEachern
PKPreeti Kar
Preeti Kar
DNDaphne Nakhid
Daphne Nakhid
EMElena Mitevska
Elena Mitevska
CTChristina Tortorelli
Christina Tortorelli
WGW. Ben Gibbard
W. Ben Gibbard
Background: Prenatal alcohol exposure (PAE) can have significant negative consequences on the health outcomes of children. Children with PAE often experience other prenatal and postnatal adverse exposures. Increased rates of general health concerns and atypical behaviours are seen in both children with PAE as well as with other patterns of adverse exposures, although these have not been systematically described. The association between multiple adverse exposures and adverse health concerns and atypical behaviours in children with PAE is unknown.Methods: Demographic information, medical history, adverse exposures, health concerns, and atypical behaviours were collected from children with confirmed PAE (n = 22; 14 males, age range = 7.9–15.9 years) and their caregivers. Support vector machine learning classification models were used to predict the presence of health concerns and atypical behaviours based on adverse exposures. Associations between the sums of adverse exposures, health concerns, and atypical behaviours were examined using correlation analysis.Results: All children experienced health concerns, the most common being sensitivity to sensory inputs (64%; 14/22). Similarly, all children engaged in atypical behaviours, with atypical sensory behaviour (50%; 11/22) being the most common. Prenatal alcohol exposure was most important factor for predicting some health concerns and atypical behaviours, and alone and in combination with other factors. Simple associations between adverse exposures could not be identified for many health concerns and atypical behaviours.Conclusion: Children with PAE and other adverse exposures experience high rates of health concerns and atypical behaviours. This study demonstrates the complex effects of multiple adverse exposures on health and behaviour in children.