MicroRNAs (miRNAs), acting as oncogenes or tumor suppressors in humans, play a key role in regulating gene expression and are believed to be important for developing novel therapeutic treatments and clinical prognoses. Due to their short lengths (17–25 nucleotides) and extremely low concentrations (typically < picomolar) in biological samples, quantification of miRNAs has been challenging to conventional biochemical methods, such as Northern blotting, microarray, and quantitative polymerase chain reaction (qPCR). In this work, a biotinylated miRNA (biotin-miRNA) whose sequence is the same as that of a miRNA target is introduced into samples of interest and allowed to compete with the miRNA target for the oligonucleotide (ODN) probe preimmobilized onto an electrode. Voltammetric quantification of the miRNA target was accomplished after complexation of the biotin-miRNA with ferrocene (Fc)-capped gold nanoparticle/streptavidin conjugates. The Fc oxidation current was found to be inversely proportional to the concentration of target miRNA between 10 fM and 2.0 pM. The method is highly reproducible (relative standard deviation (RSD) < 5%), regenerable (at least 8 regeneration/assay cycles without discernible signal decrease), and selective (with sequence specificity down to a single nucleotide mismatch). The low detection levels (10 fM or 0.1 attomoles of miRNA in a 10 μL solution) allow the direct quantification of miRNA-182, a marker correlated to the progression of glioma in patients, to be performed in serum samples without sample pretreatment and RNA extraction and enrichment. The concentration of miRNA-182 in glioma patients was found to be 3.1 times as high as that in healthy persons, a conclusion in excellent agreement with a separate qPCR measurement of the expression level. The obviations of the requirement of an internal reference in qPCR, simplicity, and cost-effectiveness are other additional advantages of this method for detection of nucleic acids in clinical samples.

While DNA has been widely used for directing the growth and assembly of nanomaterials, the reverse reaction, etching nanoparticles using DNA, has yet to be demonstrated. We herein communicate that poly-cytosine (poly-C) DNA can efficiently etch silver nanoparticles (AgNPs) followed by Ostwald ripening at higher DNA concentrations. The etching process was precisely controlled by varying the length, sequence, and concentration of DNA, and the number of consecutive cytosines is particularly important for the efficacy of etching. In addition to spherical AgNPs, etching also occurred for silver nanoplates displaying interesting color changes. Compared to other chemical etching agents such as H₂O₂ and ferricyanide, DNA is highly biocompatible, allowing biological applications. Poly-C etching enhanced the cytotoxicity of AgNPs against cancer cells, and Gram-positive and Gram-negative bacterial cells. This study will stimulate many related studies in DNA nanotechnology, bioanalytical sensors and nanomedicine.