Glacier surfaces support unique microbial food webs dominated by organic and inorganic debris called ‘cryoconite’. Observations from Longyearbreen, Spitsbergen, show how these aggregate particles can develop an internal structure following the cementation of mineral grains (mostly quartz and dolomite) by filamentous microorganisms. Measurements of carbon and dissolved O₂show that these microorganisms, mostly cyanobacteria, promote significant rates of photosynthesis (average 17 μgC g⁻¹d⁻¹) which assist aggregate growth by increasing the biomass and producing glue-like extracellular polymeric substances. The primary production takes place not only upon the surface of the aggregates but also just beneath, due to the translucence of the quartz particles. However, since total photosynthesis is matched by respiration (average 19 μgC g⁻¹d⁻¹), primary production does not contribute directly to cryoconite accumulation upon the glacier surface. The microorganisms therefore influence the surface albedo most by cementing dark particles and organic debris together, rather than simply growing over it. Time-lapse photographs show that cryoconite is likely to reside upon the glacier for years as a result of this aggregation. These observations therefore show that a better understanding of the relationship between supraglacial debris and ablation upon glaciers requires an appreciation of the biological processes that take place during summer.

A cryoconite granule is a biologically active aggregation of microorganisms, mineral particles and organic matter found on glacier surfaces, often within shallow pools or cryoconite holes. Observations of the microstructure of a range of cryoconite granules from locations in Svalbard and Greenland reveal their structure and composition. Whereas bulk analyses show that the mineralogy and geochemistry of these granules are broadly similar, analyses of their microstructure, using optical, epifluorescence and confocal microscopy, indicate differences in the location and quantity of photosynthetic microorganisms, heterotrophic bacteria and organic matter. Using these findings, a hypothesis on the aggregation of cryoconite is presented, centred upon multilevel aggregation by bioflocculation and filamentous binding.

This paper presents an assessment of biological activity associated with ice surface debris (cryoconite) at the ice-sheet scale. Estimates of the mass distribution of cryoconite over the Greenland ice sheet (GIS) and the biological activity associated with it are presented and then coupled with a surface mass-balance model to estimate total carbon fluxes due to respiration and photosynthesis. We find an average loading of 66gm⁻² at Kangerlussuaq, southwest Greenland, which compares well with recent estimates from Kronprins Christians Land (17–440 gm⁻²: Bøggild and others, 2010) in northeast Greenland. We also report a significant microbial biomass in cryoconite at both these places (103–104 cells mg⁻¹) and carbon fluxes of the order of 1–3 μM C g⁻¹d⁻¹ for both respiration and photosynthesis. The modelling indicates that total respiration and photosynthesis fluxes are likely to be ∼101–10² GgCa⁻¹ and thus far from trivial. However, estimation of the net ecosystem impact across the entire ice sheet on atmospheric CO₂ concentrations is problematic because photosynthesis rates were almost certainly low during our field campaign. Therefore, like its water balance, the carbon balance of the GIS is now known to be important, but its accurate quantification will remain elusive until more data are forthcoming.

Although uncultured microorganisms have important roles in ecosystems, their ecophysiology in situ remains elusive owing to the difficulty of obtaining live cells from their natural habitats. In this study, we employed a novel magnetic nanoparticle-mediated isolation (MMI) method to recover metabolically active cells of a group of previously uncultured phenol degraders, Burkholderiales spp., from coking plant wastewater biosludge; five other culturable phenol degraders—Rhodococcus sp., Chryseobacterium sp. and three different Pseudomonas spp.—were also isolated from the same biosludge using traditional methods. The kinetics of phenol degradation by MMI-recovered cells (MRCs) was similar to that of the original sludge. Stable isotope probing (SIP) and pyrosequencing of the 16S rRNA from the ‘heavy’ DNA (13C-DNA) fractions indicated that Burkholderiales spp. were the key phenol degraders in situ in the biosludge, consistent with the results of MRCs. Single-cell Raman micro-spectroscopy was applied to probe individual bacteria in the MRCs obtained from the SIP experiment and showed that 79% of them were fully 13C-labelled. Biolog assays on the MRCs revealed the impact of various carbon and nitrogen substrates on the efficiency of phenol degradation in the wastewater treatment plant biosludge. Specifically, hydroxylamine, a metabolite of ammonia oxidisation, but not nitrite, nitrate or ammonia, inhibited phenol degradation in the biosludge. Our results provided a novel insight into the occasional abrupt failure events that occur in the wastewater treatment plant. This study demonstrated that MMI is a powerful tool to recover live and functional cells in situ from a complex microbial community to enable further characterisation of their physiology.

Summary: Uncertainty surrounds estimates of microbial cell and organic detritus fluxes from glacier surfaces. Here, we present the first enumeration of biological particles draining from a supraglacial catchment, on Midtre Lovénbreen (Svalbard) over 36 days. A stream cell flux of 1.08 × 10⁷ cells m⁻² h⁻¹ was found, with strong inverse, non‐linear associations between water discharge and biological particle concentrations. Over the study period, a significant decrease in cell‐like particles exhibiting 530 nm autofluorescence was noted. The observed total fluvial export of ∼ 7.5 × 10¹⁴ cells equates to 15.1–72.7 g C, and a large proportion of these cells were small (< 0.5 μm in diameter). Differences between the observed fluvial export and inputs from ice‐melt and aeolian deposition were marked: results indicate an apparent storage rate of 8.83 × 10⁷ cells m⁻² h⁻¹. Analysis of surface ice cores revealed cell concentrations comparable to previous studies (6 × 10⁴ cells ml⁻¹) but, critically, showed no variation with depth in the uppermost 1 m. The physical retention and growth of particulates at glacier surfaces has two implications: to contribute to ice mass thinning through feedbacks altering surface albedo, and to potentially seed recently deglaciated terrain with cells, genes and labile organic matter. This highlights the merit of further study into glacier surface hydraulics and biological processes.

Soils are crucial in regulating ecosystem processes, such as nutrient cycling, and supporting plant growth. To a large extent, these functions are carried out by highly diverse and dynamic soil microbiomes that are in turn governed by numerous environmental factors including weathering profile and vegetation. In this study, we investigate geophysical and vegetation effects on the microbial communities of iron-rich lateritic soils in the highly weathered landscapes of Western Australia (WA). The study site was a lateritic hillslope in southwestern Australia, where gradual erosion of the duricrust has resulted in the exposure of the different weathering zones. High-throughput amplicon sequencing of the 16S rRNA gene was used to investigate soil bacterial community diversity, composition and functioning. We predicted that shifts in the microbial community would reflect variations in certain edaphic properties associated with the different layers of the lateritic profile and vegetation cover. Our results supported this hypothesis, with electrical conductivity, pH and clay content having the strongest correlation with beta diversity, and many of the differentially abundant taxa belonging to the phyla Actinobacteria and Proteobacteria. Soil water repellence, which is associated with Eucalyptus vegetation, also affected beta diversity. This enhanced understanding of the natural system could help to improve future crop management in WA since the physicochemical properties of the agricultural soils in this region are inherited from laterites via the weathering and pedogenesis processes.