Qinyuan Shen

Dr. Qinyuan Shen

orcid

Research Focus & Metrics

Academic Career Length

2Years (2025-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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29 April 2025 in Horticulturae
Verified
Journal Article
Open access
PDF file
Muhammad Junaid RaoMuhammad Junaid Rao
Muhammad Junaid Rao
Mingzheng DuanMingzheng Duan
Mingzheng Duan
CZCaixia Zhou
Caixia Zhou
JJJiejie Jiao
Jiejie Jiao
PCPeiwen Cheng
Peiwen Cheng
BZBingsong Zheng
Bingsong Zheng
Plants face various abiotic stresses in their natural environments that trigger the production of reactive oxygen species (ROS), leading to oxidative stress and potential cellular damage. This comprehensive review examines the interplay between plant antioxidant defense systems and ROS under abiotic stress conditions. We discuss the major enzymatic antioxidants, including superoxide dismutase, catalase, reductases, and peroxidases, as well as non-enzymatic antioxidants, such as ascorbic acid, glutathione, polyphenols, and flavonoids, which play crucial roles in ROS detoxification. This review elaborates on different types of ROS, their production sites within plant cells, and their dual role as both damaging oxidants and key signaling molecules. We discuss how various abiotic stresses—including heat, cold, drought, flooding, salinity, and heavy metal toxicity—induce oxidative stress and trigger specific antioxidant responses in plants. Additionally, the mechanisms of ROS generation under these abiotic stress conditions and the corresponding activation of enzymatic and non-enzymatic scavenging systems are discussed in detail. This review also discusses recent advances in understanding ROS signaling networks and their integration with other stress-response pathways. This knowledge provides valuable insights into plant stress-tolerance mechanisms and suggests potential strategies for developing stress-resistant crops by enhancing antioxidant defense systems. Moreover, the strategic ROS modulation through priming, exogenous antioxidants, nanoparticles, or genetic tools can enhance plant resilience. Integrating these methods with agronomic practices (e.g., irrigation management) offers a sustainable path to climate-smart agriculture. Our review reveals that ROS accumulation can be detrimental; however, the coordinated action of various antioxidant systems helps plants maintain redox homeostasis and adapt to environmental stress.

19 February 2026 in Plants
Verified
Journal Article
Open access
PDF file
JGJunhan Guo
Junhan Guo
OCOmer Conteh
Omer Conteh
YZYe Zheng
Ye Zheng
Mingzheng DuanMingzheng Duan
Mingzheng Duan
HYHuwei Yuan
Huwei Yuan
Muhammad Junaid RaoMuhammad Junaid Rao
Muhammad Junaid Rao
Drought stress severely compromises the physiological integrity and secondary metabolism of medicinal plants. This study integrated physiological, biochemical, and ultra-performance liquid chromatography–tandem mass spectrometry (UPLC-MS/MS) analyses to investigate the effects of exogenous methyl jasmonate (MeJA) on drought-stressed Ilex rotunda seedlings. Drought reduced relative water content by 29% and chlorophyll by >50%, while elevating H2O2 (76%) and malondialdehyde (120%). MeJA application mitigated these impairments, reducing oxidative markers by 25% and enhancing non-enzymatic antioxidant capacity, as shown by a 74% increase in DPPH radical scavenging activity and a 141% rise in total phenolic content. Hierarchical clustering analysis (HCA), principal component analysis (PCA), and orthogonal partial least squares-discriminant analysis (OPLS-DA), and pathway mapping confirmed a significant reprogramming of the phenolic metabolome, particularly within phenylpropanoid and benzoate biosynthesis pathways. Drought + MeJA-treated plants exhibited a distinct and enriched profile compared to both well-watered control and drought-stressed groups. This reprogramming specifically elevated key hydroxycinnamates, including verbascoside and neochlorogenic acid (increased by 50% and 52%, respectively), while suppressing alternative phenolic branches. These findings demonstrate that MeJA orchestrates a shift from enzymatic scavenging to a potent metabolite-based antioxidant system, positioning it as an effective elicitor for enhancing drought resilience and enriching the high-value phytochemicals in I. rotunda.

18 July 2025 in Plants
Verified
Journal Article
Open access
PDF file
QHQiaoyu Huang
Qiaoyu Huang
HLHaixia Liu
Haixia Liu
QSQinyuan Shen
Qinyuan Shen
HYHuwei Yuan
Huwei Yuan
FCFuqiang Cui
Fuqiang Cui
BZBingsong Zheng
Bingsong Zheng
Grafting involves complex hormonal interactions at graft interfaces that are not yet fully understood. In this study, we analyzed hormone fluctuations and gene expression during callus proliferation and vascular tissue differentiation in hickory (Carya cathayensis Sarg.) grafts. Cytokinin and ethylene precursor ACC levels steadily increased after grafting. The biosynthetic genes for these hormones (IPT3, ACS1, ACO1, and ACO5) exhibited heightened expression. Genes related to cytokinin signaling (RR3, ARR4, and ZFP5) and ethylene signaling (MKK9, ESE1, and ESE3) were similarly upregulated. Conversely, genes associated with jasmonic acid, abscisic acid, and strigolactone pathways were downregulated, including synthesis genes (AOC4 and AOS) and those involved in signal transduction (NAC3, WRKY51, and SMAX1). Correspondingly, JA-Ile and 5-deoxystrigol levels significantly decreased. Indole-3-acetic acid (IAA) levels also dropped during the early stages of graft union formation. These results suggest that low auxin concentrations may be essential in the initial stages after grafting to encourage callus proliferation, followed by an increase at later stages to facilitate vascular bundle differentiation. These findings imply that maintaining a balance between low auxin levels and elevated cytokinin and ethylene levels may be critical to support cell division and callus formation during the initial proliferation phase. Later, during the vascular differentiation phase, a gradual rise in auxin levels, accompanied by elevated ethylene, may facilitate the differentiation of vascular bundles in hickory grafts.

16 January 2026 in Plants
Verified
Journal Article
Open access
PDF file
QSQinyuan Shen
Qinyuan Shen
LHLiangye Huang
Liangye Huang
PJPiyu Ji
Piyu Ji
Muhammad Junaid RaoMuhammad Junaid Rao
Muhammad Junaid Rao
WLWanchun Li
Wanchun Li
BZBingsong Zheng
Bingsong Zheng
Cadmium (Cd) pollution poses significant threats to ecosystems and human health, with agricultural soils in China particularly affected. Ilex verticillata, a popular ornamental plant, has not been extensively studied for its response to Cd stress. This study investigated the physiological and molecular mechanisms underlying Cd stress tolerance in I. verticillata, focusing on auxin signaling pathways. Under Cd stress (500 mmol/kg soil), I. verticillata exhibited inhibited stem growth, reduced photosynthetic capacity, and elevated oxidative stress markers such as malondialdehyde, H2O2, ·O2−, and antioxidant enzyme activities. Transcriptomic analysis revealed 3750 differentially expressed genes (DEGs) with significant enrichment in auxin signaling pathways. Six nucleus-localized IvIAA genes were identified and shown to interact with the transcription factor IvMYB77, suggesting a regulatory module in Cd stress responses. These findings highlight the role of auxin signaling in mediating Cd stress tolerance and provide insights into the molecular adaptation of I. verticillata to heavy metal pollution.

27 June 2026 in Antioxidants
Verified
Journal Article
Open access
PDF file
HYHuwei Yuan
Huwei Yuan
QSQinyuan Shen
Qinyuan Shen
YZYe Zheng
Ye Zheng
Mingzheng DuanMingzheng Duan
Mingzheng Duan
JGJunhan Guo
Junhan Guo
Muhammad Junaid RaoMuhammad Junaid Rao
Muhammad Junaid Rao
Drought stress imposes oxidative damage on plants, yet the tissue-specific roles of salicylic acid (SA) in modulating phenolic metabolism remain poorly understood in woody species. Using Ilex rotunda seedlings, we investigated whether exogenous SA (100 µM) mitigates drought-induced oxidative damage and reshapes phenolic profiles in different tissues. Drought alone increased leaf total phenolics by 32% but depleted root phenolics by 29%, whereas combined drought + SA (DSA) treatment partially restored root phenolic levels, coinciding with elevated malondialdehyde (MDA) (2.2-fold in leaves, 2.6-fold in roots) and H2O2. Leaf antioxidant capacity increased under drought (DPPH by 73%, •OH by 33%), whereas root DPPH declined by 27% despite a 26% rise in •OH scavenging. SA alone induced mild oxidative responses and selectively upregulated caffeoylquinic and galloyl derivatives, notably 1-Caffeoylquinic acid (log2FC = 6.38) in leaves. DSA treatment mitigated oxidative damage—reducing leaf MDA by 44% and root H2O2 by 38%. Metabolomics revealed tissue-specific reprogramming leaves accumulated dicaffeoylshikimic acid (log2FC = 10.66) and trilobatin D (log2FC = 11.18) under DSA, whereas roots showed contrasting patterns with up-accumulation of vanillate (log2FC = 5.77) and suppression of 3,5-dicaffeoylquinic acid (log2FC = −7.21) under drought, with stronger metabolic reprogramming in leaves than roots. Our findings indicate that SA-mediated drought tolerance is associated with tissue-specific phenolic reprogramming, identifying candidate indicators that advance the mechanistic understanding of woody plant resilience to drought. These results provide a framework for translating metabolomic signatures into practical strategies for stress mitigation in medicinal perennials facing climate change.

12 May 2026 in Plants
Verified
Journal Article
Open access
PDF file
Kamran ShahKamran Shah
Kamran Shah
WDWenjun Dai
Wenjun Dai
QSQinyuan Shen
Qinyuan Shen
YZYanjun Zhang
Yanjun Zhang
JGJunhan Guo
Junhan Guo
BZBingsong Zheng
Bingsong Zheng
Camphora officinarum (syn. Cinnamomum camphora) is an ecologically, medicinally, and economically important tree species widely known for its essential oils (EOs), timber, and long history of use in traditional medicine. In recent years, renewed interest in this species has been driven by taxonomic revision, the discovery of chemically distinct chemotypes, and advances in genomics, metabolomics, and biotechnological processing. This review summarizes current knowledge on the botany, distribution, phytochemistry, biological properties, agro-industrial value, and biotechnological potential of C. officinarum. Particular attention is given to the genetic and metabolic basis of terpene diversity, especially the role of terpene synthase (TPS) gene expansion in the formation of camphor-, linalool-, borneol-, cineole-, and citral-type profiles. We also discuss developments in essential oil extraction, the utilization of non-volatile constituents such as flavonoids and lignans, and the nutritional value of seed kernel oil rich in medium-chain fatty acids (MCFAs). In addition, recent progress in tissue culture, multi-omics analysis, metabolic engineering, and nano-enabled delivery systems is reviewed. The paper also considers important safety and ecological issues, including the dose-dependent toxicity of camphor and the contrasting status of the species as a protected native resource in East Asia and an invasive plant in some introduced regions. Overall, this review provides an updated and balanced overview of C. officinarum, identifies key knowledge gaps, and highlights future prospects for sustainable utilization, conservation of native genetic resources, and exploitative control of invasive populations.