Yong-Gun Kim

Prof. Yong-Gun Kim

Kyungpook National University, School of Dentistry, Department of Periodontology
orcid

Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 April 2020 in Biochemical and Biophysical Research Communications
Verified
Journal Article
Closed access
HKHyo Jeong Kim
Hyo Jeong Kim
SSSeung Jun Seo
Seung Jun Seo
JKJae-Young Kim
Jae-Young Kim
YKYong-Gun Kim
Yong-Gun Kim
YLYoungkyun Lee
Youngkyun Lee

17 August 2016 in Human Genomics
Verified
Journal Article
Open access
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YKYong-Gun Kim
Yong-Gun Kim
MKMinjung Kim
Minjung Kim
JKJi Hyun Kang
Ji Hyun Kang
HKHyo Jeong Kim
Hyo Jeong Kim
JPJin-Woo Park
Jin-Woo Park
YLYoungkyun Lee
Youngkyun Lee
Periodontitis is the most common chronic inflammatory disease caused by complex interaction between the microbial biofilm and host immune responses. In the present study, high-throughput RNA sequencing was utilized to systemically and precisely identify gene expression profiles and alternative splicing. The pooled RNAs of 10 gingival tissues from both healthy and periodontitis patients were analyzed by deep sequencing followed by computational annotation and quantification of mRNA structures. The differential expression analysis designated 400 up-regulated genes in periodontitis tissues especially in the pathways of defense/immunity protein, receptor, protease, and signaling molecules. The top 10 most up-regulated genes were CSF3, MAFA, CR2, GLDC, SAA1, LBP, MME, MMP3, MME-AS1, and SAA4. The 62 down-regulated genes in periodontitis were mainly cytoskeletal and structural proteins. The top 10 most down-regulated genes were SERPINA12, MT4, H19, KRT2, DSC1, PSORS1C2, KRT27, LCE3C, AQ5, and LCE6A. The differential alternative splicing analysis revealed unique transcription variants in periodontitis tissues. The EDB exon was predominantly included in FN1, while exon 2 was mostly skipped in BCL2A1. These findings using RNA sequencing provide novel insights into the pathogenesis mechanism of periodontitis in terms of gene expression and alternative splicing.

7 January 2022 in Frontiers in Immunology
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Journal Article
Open access
JBJin-Seok Byun
Jin-Seok Byun
HLHo Yeop Lee
Ho Yeop Lee
JTJingwen Tian
Jingwen Tian
JMJi Sun Moon
Ji Sun Moon
JCJaejin Choi
Jaejin Choi
HYHyon-Seung Yi
Hyon-Seung Yi
Periodontitis is caused by an oral microbial dysbiosis-mediated imbalance of the local immune microenvironment, which is promoted by insulin resistance and obesity. The prevalence and severity of periodontitis is higher in patients with type 2 diabetes than in healthy individuals, possibly because of differences in immune responses. The level of glycemic control also affects the saliva profile, which may further promote periodontal disease in diabetes patients. Therefore, we compared the salivary exosomal miRNA profiles of patients with type 2 diabetes with those of healthy individuals, and we found that exosomal miR-25-3p in saliva is significantly enriched (by approximately 2-fold, p < 0.01) in obese patients with type 2 diabetes. We also identified CD69 mRNA as a miR-25-3p target that regulates both activation of γδ T cells and the inflammatory response. Knockdown of CD69 increased (by approximately 2-fold) interleukin-17A production of γδ T cells in vitro. To evaluate the role of exosomal miRNA on progression of periodontitis, we analyzed regional immune cells in both periodontal tissues and lymph nodes from mice with periodontitis. We found that diet-induced obesity increased the population of infiltrating pro-inflammatory immune cells in the gingiva and regional lymph nodes of these mice. Treatment with miR-25-3p inhibitors prevented the local in vivo inflammatory response in mice with periodontitis and diet-induced obesity. Finally, we showed that suppression of interleukin 17-mediated local inflammation by a miR-25-3p inhibitor alleviated (by approximately 34%) ligature-induced periodontal alveolar bone loss in mice. Taken together, these data suggest that exosomal miR-25-3p in saliva contributes to development and progression of diabetes-associated periodontitis. Discovery of additional miR-25-3p targets may provide critical insights into developing drugs to treat periodontitis by regulating γδ T cell-mediated local inflammation.

1 April 2016 in Journal of Periodontology
Verified
Journal Article
Closed access
SNSoon‐Shin Nam
Soon‐Shin Nam
JLJeong Cheol Lee
Jeong Cheol Lee
HKHyo Jeong Kim
Hyo Jeong Kim
JPJin‐Woo Park
Jin‐Woo Park
JLJae‐Mok Lee
Jae‐Mok Lee
YKYong-Gun Kim
Yong-Gun Kim
Background: Although increasing evidence indicates that serotonin (SER; 5‐hydroxytrypamine [5‐HT]) is involved in the regulation of bone metabolism, conflicting data exist regarding whether SER promotes or inhibits osteoblast differentiation and bone formation. Regeneration of functional bone is required for proper osseointegration of dental implants. Noticeably, the use of selective SER reuptake inhibitors was recently associated with the failure of osseointegrated dental implants. The present study examines the direct role of peripheral SER on the regulation of bone regeneration.Methods: The effect of SER on osteoblast differentiation and bone regeneration was examined using rat calvarial cell cultures in vitro and a rat critical‐sized calvarial defect model in vivo.Results: Rat calvarial cells expressed SER receptors Htr1 (5‐HT1) and Htr2 (5‐HT2), which are known to transmit signals in bone cells. In vitro, SER significantly reduced osteogenic differentiation and mineralization of rat calvarial cells with concomitant reduction of osteoblast marker genes including alkaline phosphatase (Alpl), osterix (Sp7), and osteocalcin (Bglap). Histologic and radiologic analyses using the rat critical‐sized calvarial defect model revealed that the existence of SER significantly inhibited β‐phase tricalcium phosphate–induced bone regeneration.Conclusion: Results suggest that SER in the local bone microenvironment might play a negative role in osteoblast differentiation and bone formation in rats.

3 May 2024 in Journal of Periodontal Research
Verified
Journal Article
Closed access
SPSeong‐Eun Park
Seong‐Eun Park
KPKanghyun Park
Kanghyun Park
EKEungyung Kim
Eungyung Kim
CKChae Yeon Kim
Chae Yeon Kim
SHSung-Min Hwang
Sung-Min Hwang
YKYong-Gun Kim
Yong-Gun Kim

1 January 2017 in Journal of Periodontal & Implant Science
Verified
Journal Article
Open access
PDF file
JLJi-Eun Lee
Ji-Eun Lee
JLJae Mok Lee
Jae Mok Lee
YLYoungkyun Lee
Youngkyun Lee
JPJin-Woo Park
Jin-Woo Park
JSJo-Young Suh
Jo-Young Suh
YKYong-Gun Kim
Yong-Gun Kim
Lee JE, et al. J Periodontal Implant Sci. 2017 Jun;47(3):134-142. https://doi.org/10.5051/jpis.2017.47.3.134