The river Rhine is heavily influenced by human activities and suffers from a series of environmental constraints which hamper a complete recovery of biodiversity. These constraints comprise intensive navigation and habitat modification by hydraulic engineering. Improving water quality while these constraints remain in place has led to increased colonization by aquatic invasive species. This tendency has been accelerated by the construction of canals connecting river basins. Over the last two centuries, the total surface area of river catchments connected to the river Rhine via inland waterways has been increased by a factor 21.6. Six principal invasion corridors for aquatic species to the river Rhine are discerned. The extensive network of inland waterways has allowed macroinvertebrate species from different bio-geographical regions to mix, changing communities, affecting the food webs and forming new constraints on the recovery of the native biodiversity. From the eighteenth century onward, in the freshwater sections of the river Rhine, a total of 45 non-indigenous macroinvertebrate species have been recorded. The average number of invasions per decade shows a sharp increase from <1 to 13 species. Currently, the contribution of non-indigenous species to the total species richness of macroinvertebrates in the river Rhine is 11.3%. The Delta Rhine and Upper Rhine exhibit higher numbers of non-indigenous species than other river sections, because the sea ports in the Delta Rhine and the Main-Danube canal function as invasion gateways. Important donor areas are the Ponto-Caspian area and North America (44.4 and 26.7% of the non-indigenous macroinvertebrate species, respectively). Transport via shipping and dispersal via man made waterways are the most important dispersal vectors. Intentional and unintentional introductions are highest for the period 1950–1992. The cumulative number of non-indigenous species in time is significantly correlated with the increase in total surface area of other river catchments connected to the river Rhine by means of networks of canals. The species richness of non-indigenous macroinvertebrates is strongly dominated by crustaceans and molluscs. Invasive species often tolerate higher salt content, temperature, organic pollution and current flow than native species. Spatiotemporal analyses of distribution patterns reveal that average and maximum dispersal rates of six invasive species vary between 44–112 and 137–461 km year⁻¹, respectively. Species arriving in upstream sections first show a shorter time lag between colonisation of the Delta and Upper Rhine than species initially arriving in downstream areas. Temporal analyses of macroinvertebrate assemblages in the littoral zones indicate that native species are displaced by non-indigenous species. However, established non-indigenous species are also displaced by more recent mass invaders.

Over the past century, the potential for aquatic species to expand their ranges in Europe has been enhanced both as a result of the construction of new canals and because of increased international trade. A complex network of inland waterways now connects some previously isolated catchments in southern (Caspian, Azov, Black, Mediterranean seas) and northern (Baltic, North, Wadden, White seas) Europe, and these waterways act as corridors for nonnative species invasions. We have developed a conceptual risk assessment model for invasive alien species introductions via European inland waterways, with specific protocols that focus on the development of environmental indicators within the socioeconomic context of the driving forces-pressures-state-impact-response framework. The risk assessment protocols and water quality indicators on alien species were tested for selected ecosystems within 3 main European invasion corridors, and these can be recommended for application as part of the Common Implementation Strategy of the European Commission Water Framework Directive, which aims to provide a holistic risk-based management of European river basins. The conceptual structure of the online Risk Assessment Toolkit for aquatic invasive alien species is provided and includes 3 main interlinked components: online risk assessment protocols, an early warning system, and an information transmitter for risk communication to end users.

Intensive land use and far-reaching regulation of the fluvial hydrosystem in the past century have reduced the hydromorphological resilience of the Rhine and Meuse river basins. Because the hydromorphodynamic processes could be controlled to a greater extent, residents of the riverine areas lost their sense of the natural dynamics of river systems, and further urbanization of areas prone to flooding took place without the potential dangers being recognized. It was particularly in the low-lying polders of the Netherlands that the potential damage from flooding increased tremendously over time. The high water discharges of the rivers Rhine and Meuse in 1993, 1995, and 1998 caused a considerable change in governmental policy, public awareness, and international cooperation in terms of flood protection and inland water management. The Dutch government is currently trying to achieve sustainable water and river management by developing and implementing a new approach to flood defense. In addition to the implementation of technological measures, the government aims to create more space for the rivers, combined with objectives from other policy areas, including the restructuring of rural areas, development of the ecological infrastructure, surface mineral extraction, land use and other area-specific projects such as housing schemes. This approach is not confined to the Netherlands: similar concepts have recently been introduced at various other locations in the Rhine and Meuse river basins. The new approach requires land-use changes and introduces new scientific research issues relating to land and water use, hydromorphology, river management, and socio-economics. This paper discusses this new approach and related scientific developments.