Funda Cipe

Prof. Dr. Funda Cipe

orcid

Research Focus & Metrics

Academic Career Length

18Years (2009-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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3 December 2020 in Blood
Verified
Journal Article
Open access
PDF file
SGSujal Ghosh
Sujal Ghosh
SBSevgi Köstel Bal
Sevgi Köstel Bal
Edwards Emily S.J.Edwards Emily S.J.
Edwards Emily S.J.
BPBethany Pillay
Bethany Pillay
RHRaúl Jiménez Heredia
Raúl Jiménez Heredia
KBKaan Boztug
Kaan Boztug
Biallelic mutations in the genes encoding CD27 or its ligand CD70 underlie inborn errors of immunity (IEIs) characterized predominantly by Epstein-Barr virus (EBV)-associated immune dysregulation, such as chronic viremia, severe infectious mononucleosis, hemophagocytic lymphohistiocytosis (HLH), lymphoproliferation, and malignancy. A comprehensive understanding of the natural history, immune characteristics, and transplant outcomes has remained elusive. Here, in a multi-institutional global collaboration, we collected the clinical information of 49 patients from 29 families (CD27, n = 33; CD70, n = 16), including 24 previously unreported individuals and identified a total of 16 distinct mutations in CD27, and 8 in CD70, respectively. The majority of patients (90%) were EBV+ at diagnosis, but only ∼30% presented with infectious mononucleosis. Lymphoproliferation and lymphoma were the main clinical manifestations (70% and 43%, respectively), and 9 of the CD27-deficient patients developed HLH. Twenty-one patients (43%) developed autoinflammatory features including uveitis, arthritis, and periodic fever. Detailed immunological characterization revealed aberrant generation of memory B and T cells, including a paucity of EBV-specific T cells, and impaired effector function of CD8+ T cells, thereby providing mechanistic insight into cellular defects underpinning the clinical features of disrupted CD27/CD70 signaling. Nineteen patients underwent allogeneic hematopoietic stem cell transplantation (HSCT) prior to adulthood predominantly because of lymphoma, with 95% survival without disease recurrence. Our data highlight the marked predisposition to lymphoma of both CD27- and CD70-deficient patients. The excellent outcome after HSCT supports the timely implementation of this treatment modality particularly in patients presenting with malignant transformation to lymphoma.

21 March 2018 in Journal of Clinical Immunology
Verified
Journal Article
Closed access
PDF file
FCFunda Cipe
Funda Cipe
CACigdem Aydogmus
Cigdem Aydogmus
NSNina K. Serwas
Nina K. Serwas
GKGonca Keskindemirci
Gonca Keskindemirci
KBKaan Boztuğ
Kaan Boztuğ

14 July 2015 in Pediatric Blood & Cancer
Verified
Journal Article
Closed access
PDF file
FCFunda Cipe
Funda Cipe
CACigdem Aydogmus
Cigdem Aydogmus
NSNina Kathrin Serwas
Nina Kathrin Serwas
DTDeniz Tuğcu
Deniz Tuğcu
MDMetin Demirkaya
Metin Demirkaya
KBKaan Boztuğ
Kaan Boztuğ

8 January 2014 in Case Reports in Pediatrics
Verified
Journal Article
Open access
PDF file
FCFunda Cipe
Funda Cipe
CACigdem Aydogmus
Cigdem Aydogmus
AHArzu Babayigit Hocaoglu
Arzu Babayigit Hocaoglu
MKMerve Kilic
Merve Kilic
GKGul Demet Kaya
Gul Demet Kaya
EGElif Yilmaz Gulec
Elif Yilmaz Gulec
Artemis, DNA ligase IV, DNA protein kinase catalytic subunit, and Cernunnos/XLF genes in nonhomologous end joining pathways of DNA repair mechanisms have been identified as responsible for radiosensitive SCID. Here, we present a 3-year-old girl patient with severe growth retardation, bird-like face, recurrent perianal abscess, pancytopenia, and polydactyly. Firstly, she was thought as Fanconi anemia and spontaneous DNA breaks were seen on chromosomal analysis. After that DEB test was found to be normal and Fanconi anemia was excluded. Because of that she had low IgG and IgA levels, normal IgM level, and absence of B cells in peripheral blood; she was considered as primary immunodeficiency, Nijmegen breakage syndrome. A mutation in NBS1 gene was not found; then Cernunnos/XLF deficiency was investigated due to clinical similarities with previously reported cases. Homozygous mutation in Cernunnos/XLF gene (NHEJ1) was identified. She is now on regular IVIG prophylaxis and has no new infection. Fully matched donor screening is in progress for bone marrow transplantation which is curative treatment of the disease. In conclusion, the patients with microcephaly, bird-like face, and severe growth retardation should be evaluated for hypogammaglobulinemia and primary immunodeficiency diseases.

28 September 2009 in Pediatrics International
Verified
Journal Article
Closed access
PDF file
ZAZafer Arslan
Zafer Arslan
FCFunda Cipe
Funda Cipe
SÖSerap Özmen
Serap Özmen
MKMeda Kondolot
Meda Kondolot
IPI. Etem Piskin
I. Etem Piskin
AYAysel Yöney
Aysel Yöney

21 September 2018 in Pediatric Hematology and Oncology
Verified
Journal Article
Closed access
FCFunda Cipe
Funda Cipe
MCMehmet Halil Celiksoy
Mehmet Halil Celiksoy
BEBiray Erturk
Biray Erturk
ÇAÇiğdem Aydogmus
Çiğdem Aydogmus
Introduction: Severe congenital neutropenia (SCN) includes a group of genetic disorders which cause to arrest of neutrophil maturation. SCN can be associated with heterogenous group of genetic defects in ELANE, GFI1, HAX1, G6PC3, JAGN1, VPS45 or activating mutations in the Wiskott-Aldrich syndrome (WAS) gene. Aim: Here we report a patient who has a HAX1 mutation presented with cyclic manner. Case Report: A 6 year old female patients was admitted with recurrent apthous stomatitis. We followed the patient as cyclic neutropenia according to complete blood count results 2 times for 6 weeks. After persistant neutropenia developed during a severe varicella infection, we analysed HAX1 mutation, the result was interesting and incompatible with reported cyclic neutropenia patients. Conclusion: We suggest that HAX1 deficiency should be thought in patients who have normal neutrophil counts in the between of infections.