Filipe Inácio Matias

Filipe Inácio Matias

orcid

Research Focus & Metrics

Academic Career Length

10Years (2017-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 January 2020 in The Plant Phenome Journal
Verified
Journal Article
Open access
PDF file
FMFilipe Inácio Matias
Filipe Inácio Matias
MCMaria V. Caraza‐Harter
Maria V. Caraza‐Harter
JEJeffrey Endelman
Jeffrey Endelman
Remote sensing is revolutionizing the phenotyping of agricultural field trials, but for many researchers, the extraction of plot‐level results is a bottleneck. We have developed the R package FIELDimageR as a user‐friendly tool to analyze orthomosaic images containing many plots. The basic workflow involves cropping and rotating the image, followed by the creation of a shapefile based on the experimental design. The package includes functions to calculate the number of plants per plot, canopy cover percentage, vegetation indices, and plant height. FIELDimageR is publicly available as a GitHub repository (https://github.com/filipematias23/FIELDimageR).

28 June 2019 in Molecular Breeding
Verified
Journal Article
Closed access
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FMFilipe Inácio Matias
Filipe Inácio Matias
FAFilipe Couto Alves
Filipe Couto Alves
KMKarem Guimarães Xavier Meireles
Karem Guimarães Xavier Meireles
SBSanzio Carvalho Lima Barrios
Sanzio Carvalho Lima Barrios
CVCacilda Borges Do Valle
Cacilda Borges Do Valle
RFRoberto Fritsche-Neto
Roberto Fritsche-Neto

7 September 2017 in Crop Science
Verified
Journal Article
Closed access
PDF file
FMFilipe Inácio Matias
Filipe Inácio Matias
GGGiovanni Galli
Giovanni Galli
IGItalo Stefanine Correia Granato
Italo Stefanine Correia Granato
RNRoberto Fritsche Neto
Roberto Fritsche Neto

6 September 2018 in Crop Science
Verified
Journal Article
Closed access
PDF file
FMFilipe Inácio Matias
Filipe Inácio Matias
SBSanzio Carvalho Lima Barrios
Sanzio Carvalho Lima Barrios
LBLucas Martins Bearari
Lucas Martins Bearari
KMKarem Guimarães Xavier Meireles
Karem Guimarães Xavier Meireles
RMRogério Gonçalves Mateus
Rogério Gonçalves Mateus
RFRoberto Fritsche-Neto
Roberto Fritsche-Neto

8 March 2024 in The Plant Phenome Journal
Verified
Journal Article
Open access
JLJennifer Lachowiec
Jennifer Lachowiec
MFMax Feldman
Max Feldman
FMFilipe Inácio Matias
Filipe Inácio Matias
David LeBauerDavid LeBauer
David LeBauer
AGAlexander Gregory
Alexander Gregory
A comprehensive survey and subject‐expert interviews conducted among agricultural researchers investigated perceived value and barriers to the adoption of unoccupied aerial systems (UASs) in agricultural research. These systems are often referred to colloquially as drones and are composed of unoccupied/uncrewed/unmanned vehicles and incorporated sensors. This study of UASs involved 154 respondents from 21 countries representing various agricultural sectors. The survey identified three key applications considered most promising for UASs in agriculture: precision agriculture, crop phenotyping/plant breeding, and crop modeling. Over 80% of respondents rated UASs for phenotyping as valuable, with 47.6% considering them very valuable. Among the participants, 41% were already using UAS technology in their research, while 49% expressed interest in future adoption. Current users highly valued UASs for phenotyping, with 63.9% considering them very valuable, compared to 39.4% of potential future users. The study also explored barriers to UAS adoption. The most commonly reported barriers were the “High cost of instruments/devices or software” (46.0%) and the “Lack of knowledge or trained personnel to analyze data” (40.9%). These barriers persisted as top concerns for both current and potential future users. Respondents expressed a desire for detailed step‐by‐step protocols for drone data processing pipelines (34.7%) and in‐person training for personnel (16.5%) as valuable resources for UAS adoption. The research sheds light on the prevailing perceptions and challenges associated with UAS usage in agricultural research, emphasizing the potential of UASs in specific applications and identifying crucial barriers to address for wider adoption in the agricultural sector.

1 January 2022 in The Plant Phenome Journal
Verified
Journal Article
Open access
FMFilipe Inácio Matias
Filipe Inácio Matias
AGAndrew Green
Andrew Green
JLJennifer A Lachowiec
Jennifer A Lachowiec
DLDavid LeBauer
David LeBauer
MFMax Feldman
Max Feldman
Bison‐Fly is the open‐source pipeline of unoccupied aerial vehicle (UAV) applications for plant breeding developed by the Spring Wheat Breeding Program at North Dakota State University in partnership with the Drone2Phenome community. We present a step‐by‐step pipeline to collect, process, and apply UAV data for plant breeding to facilitate data processing, reduce errors, and create new traits. This open‐source R code can be easily adapted for different crops and improved according to user requirements. In addition, Bison‐Fly provides a free and complete dataset with (a) RGB, Multispectral, and Digital Surface Model orthomosaics from 15 time points throughout the season; (b) field trait data with experimental design; and (c) daily metadata with soil and weather information. We hope this pipeline helps guide students, researchers, and breeders on day‐to‐day activities. Bison‐Fly is available at https://github.com/filipematias23/Bison‐Fly.