Jong-Chan Park

Dr. Jong-Chan Park


Research Focus & Metrics

Academic Career Length

6Years (2021-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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17 January 2025 in Science Advances
Verified
Journal Article
Open access
ABAleksandr Barulin
Aleksandr Barulin
EBElena Barulina
Elena Barulina
DODong Kyo Oh
Dong Kyo Oh
YJYongjae Jo
Yongjae Jo
HPHyemi Park
Hyemi Park
IKInki Kim
Inki Kim
Optical resolution photoacoustic imaging of uneven samples without z-scanning is transformative for the fast analysis and diagnosis of diseases. However, current approaches to elongate the depth of field (DOF) typically imply cumbersome postprocessing procedures, bulky optical element ensembles, or substantial excitation beam side lobes. Metasurface technology allows for the phase modulation of light and the miniaturization of imaging systems to wavelength-size thickness. Here, we propose a metalens composed of submicrometer-thick titanium oxide nanopillars, which generates an elongated beam of diffraction-limited diameter with an aspect ratio of 286 and a uniform intensity throughout the DOF. The metalens enhances visualization of phantom samples with tilted surfaces compared to conventional lenses. Moreover, the volumetric imaging of neuromelanin is facilitated for depths of up to 500 micrometers within the human midbrain and forebrain organoids that are 3D biological models of human brain regions. This approach provides a miniaturized platform for neurodegenerative disease diagnosis and drug discovery.

13 June 2022 in Advanced Science
Verified
Journal Article
Open access
JPJong-Chan Park
Jong-Chan Park
NBNatalia Barahona‐Torres
Natalia Barahona‐Torres
SJSo‐Yeong Jang
So‐Yeong Jang
KMKin Y. Mok
Kin Y. Mok
HKHaeng Jun Kim
Haeng Jun Kim
JHJohn Hardy
John Hardy
Recent multi‐omics analyses paved the way for a comprehensive understanding of pathological processes. However, only few studies have explored Alzheimer’s disease (AD) despite the possibility of biological subtypes within these patients. For this study, unsupervised classification of four datasets (genetics, miRNA transcriptomics, proteomics, and blood‐based biomarkers) using Multi‐Omics Factor Analysis+ (MOFA+), along with systems‐biological approaches following various downstream analyses are performed. New subgroups within 170 patients with cerebral amyloid pathology (Aβ+) are revealed and the features of them are identified based on the top‐rated targets constructing multi‐omics factors of both whole (M‐TPAD) and immune‐focused models (M‐IPAD). The authors explored the characteristics of subtypes and possible key‐drivers for AD pathogenesis. Further in‐depth studies showed that these subtypes are associated with longitudinal brain changes and autophagy pathways are main contributors. The significance of autophagy or clustering tendency is validated in peripheral blood mononuclear cells (PBMCs; n = 120 including 30 Aβ‐ and 90 Aβ+), induced pluripotent stem cell‐derived human brain organoids/microglia (n = 12 including 5 Aβ‐, 5 Aβ+, and CRISPR‐Cas9 apolipoprotein isogenic lines), and human brain transcriptome (n = 78). Collectively, this study provides a strategy for precision medicine therapy and drug development for AD using integrative multi‐omics analysis and network modelling.

3 July 2024 in BMB Reports
Verified
Journal Article
Open access
PDF file
RKRian Kang
Rian Kang
SPSoomin Park
Soomin Park
SSSaewoon Shin
Saewoon Shin
GBGyusoo Bak
Gyusoo Bak
JPJong-Chan Park
Jong-Chan Park
Rian Kang, Soomin Park, Saewoon Shin, Gyusoo Bak & Jong-Chan Park. BMB Reports 2024;57:311-7. https://doi.org/10.5483/BMBRep.2024-0077

23 May 2024 in International Journal of Stem Cells
Verified
Journal Article
Open access
PDF file
TKTae Hwan Kwak
Tae Hwan Kwak
SPSi-Hyung Park
Si-Hyung Park
SLSiyoung Lee
Siyoung Lee
YSYujeong Shin
Yujeong Shin
KYKi-Jun Yoon
Ki-Jun Yoon
JYJi Hun Yang
Ji Hun Yang
Taehwan Kwak, Si-Hyung Park, Siyoung Lee, Yujeong Shin, Ki-Jun Yoon, Seung-Woo Cho, Jong-Chan Park, Seung-Ho Yang, Heeyeong Cho, Heh-In Im, Sun-Ju Ahn, Woong Sun, Ji Hun Yang. IJSC -0001;0:. https://doi.org/10.15283/ijsc24056

30 May 2025 in Advanced Science
Verified
Journal Article
Open access
YJYongjae Jo
Yongjae Jo
YKYoungjun Kim
Youngjun Kim
RKRian Kang
Rian Kang
SLSeho Lee
Seho Lee
DNDang Du Nguyen
Dang Du Nguyen
IKInki Kim
Inki Kim
Noninvasive monitoring of Alzheimer's disease (AD) biomarkers is essential for early diagnosis and treatment efficacy. However, noninvasive monitoring of tau protein secretion, a key biomarker of AD, across developmental stages, age‐related variations, and the interaction between apolipoprotein E (APOE) and the tau protein axis is not yet accomplished. Here, the label‐free and non‐invasive detection of multiple tau variants dynamics across developmental stages, age‐related variants, and various APOE isogenic genotyes is presented to investigate the APOE–tau axis using human cerebral organoids (hCOs) combined with surface‐enhanced Raman spectroscopy (SERS). Principal component analysis (PCA) of SERS signals successfully identifies four developmental stages of hCOs: embryonic body, neuronal differentiation, maturation, and maintenance phases. Temporal dynamics of age‐related tau protein secretion are observed, reflecting characteristics associated with AD, which are diminished by astrocyte expression. PCA‐based dimensionality reduction of SERS signals further reveals distinct clustering for different APOE isogenic genotypes, with tau protein secretion increasing from APOE2/E2 to APOE4/E4, providing direct insight into the APOE–tau axis in AD. This study introduces a novel method for the non‐invasive clinical assessments of disease conditions, dynamics, and the relationship between APOE and tau in AD.

13 October 2024 in FEBS Open Bio
Verified
Journal Article
Open access
SLSang‐Eun Lee
Sang‐Eun Lee
SPSoomin Park
Soomin Park
RKRian Kang
Rian Kang
TLTaehoon Lee
Taehoon Lee
WYWon Jong Yu
Won Jong Yu
JPJong-Chan Park
Jong-Chan Park
Alzheimer's disease (AD) is characterized by significant alterations in hippocampal function and structure, but the molecular mechanisms underlying the hippocampal region remain elusive. We integrated multiple transcriptome datasets including human or rat hippocampus (GSE173955, GSE129051, GSE84422) to identify candidate genes. Subsequent analyses including gene ontology analysis and protein–protein interaction mapping were performed to identify key genes and pathways. We found that glutamate ionotropic receptor NMDA‐type subunit 3A (GRIN3A) and glutamate metabotropic receptor 8 (GRM8), which are related to the glutamatergic system, were the top two annotated genes and directly related to MAPT, which encodes a tau protein. Since there is no direct evidence of interaction between tauopathy and these genes in AD, further transcriptomic data (GSE125957, GSE56772) from tau transgenic mice and experimental validations through primary rat hippocampal neurons and induced pluripotent stem cell (iPSC)‐derived brain organoids were performed. Interestingly, we identified that decreased NR3A (encoded by GRIN3A) and mGluR8 (encoded by GRM8) are correlated with tauopathy and loss of postsynaptic function in AD. Taken together, our results identified a novel tauopathy biomarker GRIN3A in AD. Furthermore, our findings suggest that an integrated approach combining public databases and diverse experimental validations can contribute to the advancement of precision medicine therapies.