Raul Alonso-Calvo

Dr. Raul Alonso-Calvo

Universidad Politécnica de Madrid, Madrid, Spain
orcid

Research Focus & Metrics

Academic Career Length

23Years (2004-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
1 July 2006 in Computers in Biology and Medicine
Verified
Journal Article
Closed access
DPD. Pérez-Rey
D. Pérez-Rey
VMV. Maojo
V. Maojo
MGM. García-Remesal
M. García-Remesal
RARaul Alonso-Calvo
Raul Alonso-Calvo
HBHolger Billhardt
Holger Billhardt
ASA. Sousa
A. Sousa

1 February 2007 in Journal of Biomedical Informatics
Verified
Journal Article
Closed access
PDF file
RARaul Alonso-Calvo
Raul Alonso-Calvo
VMV. Maojo
V. Maojo
HBHolger Billhardt
Holger Billhardt
Fernando Martin-SanchezFernando Martin-Sanchez
Fernando Martin-Sanchez
MGM. García-Remesal
M. García-Remesal
DPD. Pérez-Rey
D. Pérez-Rey

1 April 2021 in Computer Methods and Programs in Biomedicine
Verified
Journal Article
Open access
ACAntón Cid-Mejías
Antón Cid-Mejías
RARaul Alonso-Calvo
Raul Alonso-Calvo
HGHelena Gavilán
Helena Gavilán
JCJosé Crespo
José Crespo
VMVíctor Maojo
Víctor Maojo
Nanoparticles present properties that can be applied to a wide range of fields such as biomedicine, electronics or optics. The type of properties depends on several characteristics, being some of them related with the particle structure. A proper characterization of nanoparticles is crucial since it could affect their applications. To characterize a particle shape and size, the nanotechnologists employ Electron Microscopy (EM) to obtain images of nanoparticles and perform measures over them. This task could be tedious, repetitive and slow, we present a Deep Learning method based on Convolutional Neural Networks (CNNs) to detect, segment, infer orientations and reconstruct microscope images of nanoparticles. Since machine learning algorithms depend on annotated data and there is a lack of annotated datasets of nanoparticles, our work makes use of artificial datasets of images resembling real nanoparticles photographs. Our work is divided into three tasks. Firstly, a method to create annotated datasets of artificial images resembling Scanning Electron Microscope (SEM). Secondly, two models of convolutional neural networks are trained using the artificial datasets previously generated, the first one is in charge of the detection and segmentation of the nanoparticles while the second one will infer the nanoparticle orientation. Finally, the 3D reconstruction module will recreate in a 3D scene the set of detected particles. We have tested our method with five different shapes of basic nanoparticles: spheres, cubes, ellipsoids, hexagonal discs and octahedrons. An analysis of the reconstructions was conducted by manually comparing each of them with the real images. The results obtained have been promising, the particles are segmented and reconstructed accordingly to their shapes and orientations. We have developed a method for nanoparticle detection and segmentation in microscope images. Moreover, we can also infer an approximation of the 3D orientation of the particles and, in conjunction with the detections, create a 3D reconstruction of the photographs. The novelty of our approximation lies in the dataset used. Instead of using annotated images, we have created the datasets simulating the microscope images by using basic geometrical objects that imitate real nanoparticles.

16 February 2024 in Journal of Dentistry
Verified
Journal Article
Open access
MBM Bonfanti-Gris
M Bonfanti-Gris
Angel HerreraAngel Herrera
Angel Herrera
SPSergio Paraiso-Medina
Sergio Paraiso-Medina
RARaul Alonso-Calvo
Raul Alonso-Calvo
FMFrancisco Martínez-Rus
Francisco Martínez-Rus
GRGuillermo Pradíes Ramiro
Guillermo Pradíes Ramiro
To evaluate the diagnostic performance of three versions of a deep-learning convolutional neural network in terms of object detection and segmentation using a multiclass panoramic radiograph dataset. A total of 600 orthopantomographies were randomly selected for this study and manually annotated by a single operator using an image annotation tool (COCO Annotator v.11.0.1) to establish ground truth. The annotation classes included teeth, maxilla, mandible, inferior alveolar nerve, dento- and implant-supported crowns/pontics, endodontic treatment, resin-based restorations, metallic restorations, and implants. The dataset was then divided into training, validation, and testing subsets, which were used to train versions 5, 7, and 8 of You Only Look Once (YOLO) Neural Network. Results were stored, and a posterior performance analysis was carried out by calculating the precision (P), recall (R), F1 Score, Intersection over Union (IoU), and mean average precision (mAP) at 0.5 and 0.5-0.95 thresholds. The confusion matrix and recall precision graphs were also sketched. YOLOv5s showed an improvement in object detection results with an average R = 0.634, P = 0.781, mAP0.5 = 0.631, and mAP0.5-0.95 = 0.392. YOLOv7m achieved the best object detection results with average R = 0.793, P = 0.779, mAP0.5 = 0.740, and mAP0.5-0.95 = 0,481. For object segmentation, YOLOv8m obtained the best average results (R = 0.589, P = 0.755, mAP0.5 = 0.591, and mAP0.5-0.95 = 0.272). YOLOv7m was better suited for object detection, while YOLOv8m demonstrated superior performance in object segmentation. The most frequent error in object detection was related to background classification. Conversely, in object segmentation, there is a tendency to misclassify True Positives across different dental treatment categories. General diagnostic and treatment decisions based on panoramic radiographs can be enhanced using new artificial intelligence-based tools. Nevertheless, the reliability of these neural networks should be subjected to training and validation to ensure their generalizability.

1 May 2010 in Procedia Computer Science
Verified
Journal Article
Open access
RARaul Alonso-Calvo
Raul Alonso-Calvo
JCJose Crespo
Jose Crespo
MGMiguel Garc’iA-Remesal
Miguel Garc’iA-Remesal
AAAlberto Anguita
Alberto Anguita
VMVictor Maojo
Victor Maojo
Managing large image collections has become an important issue for information companies and institutions. We present a cloud computing service and its application for the storage and analysis of very-large images. This service has been implemented using multiple distributed and collaborative agents. For image storage and analysis, a regionoriented data structure is utilized, which allows storing and describing image regions using low-level descriptors. Different types of structural relationships between regions are also taken into account. A distinctive goal of this work is that data operations are adapted for working in a distributed mode. This allows that an input image can be divided into different sub-images that can be stored and processed separately by different agents in the system, facilitating processing very-large images in a parallel manner. A key aspect to decrease processing time for parallelized tasks is the use of an appropriate load balancer to distribute and assign tasks to agents with less workload.

1 March 2015 in Computer Methods and Programs in Biomedicine
Verified
Journal Article
Closed access
RARaul Alonso-Calvo
Raul Alonso-Calvo
DPDavid Perez-Rey
David Perez-Rey
SPSergio Paraiso-Medina
Sergio Paraiso-Medina
BCBrecht Claerhout
Brecht Claerhout
PHPhilippe Hennebert
Philippe Hennebert
ABAnca Bucur
Anca Bucur